CX287340

Overview
NameCX287340
Unique NameCX287340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length415
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.273e-26
Identity = 55/109 (50.46%), Postives = 86/109 (78.90%), Query Frame = 3
Query:   12 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 335
            L+ +V++RD K+SNILLD  ++ KLSDFGLAKL  A E+S+VTTR+MGT+GY APEY +TG L  +SDV++FG++++E+++G    +  RP G+ +LV+WL+  ++N++
Sbjct:  210 LQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKH 318          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.663e-26
Identity = 60/138 (43.48%), Postives = 94/138 (68.12%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG-AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G +P +VHRD+KSSNILLD Q   KL+DFGL++     + S+V+T V GTFGY+  EY  T  L+E+SDVYSFG++++E+I+ +  +D++R     ++ EW+K M+T  +   ++DP+LQ    S +  +AL +A+
Sbjct:  681 HIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNR--DMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAM 816          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.663e-26
Identity = 53/136 (38.97%), Postives = 86/136 (63.24%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVA 410
            H+  EP ++HRDIKSSNILL   +   L+DFGLA+L+    ++VTT ++GT GY+ PEY    +   + DVYSFG++++E+++GR P+D  +P G  +L+ W+  M T +    + DP + +K  +  +   L +A
Sbjct:  858 HQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIA 993          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.663e-26
Identity = 63/144 (43.75%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE---RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVN-LVEWLKTMVTNRNAE---GVLDPRLQEKPCSRALKRALLVAL 413
            H GL+  V+HRD+KSSNILLD++W P+++DFGLAK++ A+   R +    V GT GY+APEYA T  +NE+SDVYSFG+++ME+++G+ P++     GE N +V W+ ++    N E    ++D  ++++    ALK  L +AL
Sbjct:  803 HHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDF--GENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKEDALK-VLTIAL 943          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.171e-26
Identity = 56/137 (40.88%), Postives = 90/137 (65.69%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G +P ++HRDIK+SNILLD+++  K++DFGLAK      ++++TRV GT GYVAPEYA  G L E+SDVYSFG++++E++S R  +        V++ +W  ++V       V++  + EK     L++ +L+A+
Sbjct:  401 HYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAV 537          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.171e-26
Identity = 58/139 (41.73%), Postives = 95/139 (68.35%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL--LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G +P +VHRD+KS+NILLD+++  K++DFGL++   +G ++S V+T V GT GY+ PEY  T  L+E+SDVYSFGIL++E+I+ +  +D +R     N+ EW+  ++   +   ++DP+L     + ++ RAL VA+
Sbjct:  680 HTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRE--NPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAM 816          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.836e-26
Identity = 57/139 (41.01%), Postives = 85/139 (61.15%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV--DYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G  P ++HRDIK+SNILLD  + PK++DFGLA+L+ A  S+V+T + GTFGY+ PEY  +     + DVYSFG++++E+++G+ P   D+    G  NLV W    +    A  V+DP L       +  R L +A+
Sbjct: 1032 HHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGG-NLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAM 1169          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.836e-26
Identity = 53/139 (38.13%), Postives = 96/139 (69.06%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSR--PPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H+  +PK++HRD+K++NILLD+++   + DFGLAKL+  + ++VTT V GT G++APEY STG  +E++DV+ +G++++E+I+G+   D +R     +V L++W+K ++  +  E ++D  LQ       +++ + VAL
Sbjct:  405 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVAL 543          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.704e-26
Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            HE    K+VHRDIK++N+LLD   N K+SDFGLAKL   E ++++TR+ GT GY+APEYA  G L +++DVYSFG++ +E++SG++  +Y      V L++W   +    +   ++DP L      +   R L +AL
Sbjct:  784 HEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIAL 920          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.318e-26
Identity = 56/137 (40.88%), Postives = 87/137 (63.50%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            HE    K+VHRDIK++N+LLD   N K+SDFGLAKL   E ++++TR+ GT GY+APEYA  G L +++DVYSFG++ +E++SG++  +Y      + L++W   +    +   ++DP L      +   R L +AL
Sbjct:  782 HEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIAL 918          
The following BLAST results are available for this feature:
BLAST of CX287340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
CX32_ARATH1.273e-2650.46Probable serine/threonine-protein kinase Cx32, chl... [more]
Y1756_ARATH1.663e-2643.48Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA1.663e-2638.97Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
IKU2_ARATH1.663e-2643.75Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
RKF3_ARATH2.171e-2640.88Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH2.171e-2641.73Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH2.836e-2641.01Leucine-rich repeat receptor protein kinase EXS OS... [more]
BAK1_ARATH2.836e-2638.13BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5343_ARATH3.704e-2641.61Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH6.318e-2640.88Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC01008E02SK Veg1 Citrus clementina cDNA clone C01008E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287340 ID=CX287340; Name=CX287340; organism=Citrus clementina; type=EST; length=415bp
TGCATGAGGGGCTTGAACCAAAGGTTGTTCACCGTGACATCAAGTCAAGC
AACATTTTGCTCGATAAGCAGTGGAATCCGAAATTATCCGATTTTGGCCT
AGCAAAGCTTTTGGGCGCAGAGAGGAGCTACGTGACAACTCGTGTGATGG
GAACATTCGGGTATGTGGCACCAGAATATGCTAGCACTGGGATGTTGAAT
GAAAGAAGCGATGTATACAGTTTTGGTATCCTTATCATGGAAGTAATTTC
TGGTAGAAATCCAGTGGATTACAGCCGCCCTCCAGGGGAGGTGAATTTAG
TTGAGTGGCTCAAAACAATGGTCACAAATCGCAATGCAGAGGGTGTTTTG
GATCCTAGGTTGCAAGAGAAGCCTTGTTCAAGGGCATTGAAGCGTGCTCT
TTTAGTAGCTTTACG
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