CX287340

Overview
NameCX287340
Unique NameCX287340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length415
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: PKN1_COREF (Probable serine/threonine-protein kinase CE0033 OS=Corynebacterium efficiens GN=CE0033 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.498e-11
Identity = 33/91 (36.26%), Postives = 55/91 (60.44%), Query Frame = 3
Query:   15 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT--TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 281
            E  ++HRD+K +NI+++     K+ DFG+A+ L    S +T    V+GT  Y++PE A     + RSDVY+ G ++ E+++GR P +   P
Sbjct:  129 EAGIIHRDVKPANIMINNTGGVKVMDFGIARALDDSTSAMTQTAAVIGTAQYLSPEQARGKPADARSDVYAAGCVLYELVTGRPPFEGESP 219          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: NEK2_HUMAN (Serine/threonine-protein kinase Nek2 OS=Homo sapiens GN=NEK2 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.498e-11
Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 3
Query:   24 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 245
            V+HRD+K +N+ LD + N KL DFGLA++L  + S+  T V GT  Y++PE  +    NE+SD++S G L+ E+
Sbjct:  137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: KPEL_DROME (Serine/threonine-protein kinase pelle OS=Drosophila melanogaster GN=pll PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.498e-11
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT--TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV--NLVEWLK 314
            H      ++H DIK +NILLD+   PK+ DFGL +        V    +V GT  Y+ PE+ +   L+   DVYSFGI+++EV +GR   D   P  E   NL++++K
Sbjct:  335 HTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTD-RVPENETKKNLLDYVK 441          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: GEFX_DICDI (RasGEF domain-containing serine/threonine-protein kinase X OS=Dictyostelium discoideum GN=gefX PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.498e-11
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 3
Query:   21 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 263
            K++HRD+KS NILLD+    +L DFG A++    +      + GT G+VAPE       +   DV+S+G+++ E+I+GR P
Sbjct:  135 KIIHRDLKSKNILLDEFQRIRLCDFGFARMSEQTKKSRHMTMCGTEGWVAPEILLGMSYDTSCDVFSYGVVLAELITGRKP 215          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.498e-11
Identity = 31/79 (39.24%), Postives = 53/79 (67.09%), Query Frame = 3
Query:   18 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVM-GTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 251
            P ++HRD+K+ N+L+D  W  K++DFGLA +    +S+   + M GT G+VAPE  +     E++DVYS+ I++ E+++
Sbjct:  968 PIIIHRDLKTDNLLVDDSWQVKVADFGLATV----KSHTFAKTMCGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLT 1042          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y2350_DICDI (Probable serine/threonine-protein kinase DDB_G0292350 OS=Dictyostelium discoideum GN=DDB_G0292350 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.792e-11
Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 3
Query:   24 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 263
            ++HRD+KS NILL ++   K++DFGLA      R    TR+ GT G +APE       + +SD+YS G LI+E+  G  P
Sbjct: 1059 IIHRDLKSRNILLTRKGKVKIADFGLATTCSLGRG--RTRMCGTMGRIAPEVIRREPYDTQSDIYSLGCLIIEMAEGTVP 1136          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: SKM1_YEAST (Serine/threonine-protein kinase SKM1 OS=Saccharomyces cerevisiae GN=SKM1 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.792e-11
Identity = 48/134 (35.82%), Postives = 70/134 (52.24%), Query Frame = 3
Query:   21 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLV------EWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALL 404
            K++HRDIKS NILL+ Q   K++DFG    L  +RS   T V GT  ++APE  +    +E+ DV+S GI+++E+I G  P     P   + L+      +       ++  +  LD  LQ    SRA  R LL
Sbjct:  502 KIIHRDIKSDNILLNSQGLVKITDFGFCVELTEKRSKRATMV-GTPYWMAPEIVNQKGYDEKVDVWSLGIMLIEMIEGEPPYLNEDPLKALYLIANNGSPKLRHPESVSKQTKQFLDACLQVNVESRASVRKLL 634          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: RIPK3_HUMAN (Receptor-interacting serine/threonine-protein kinase 3 OS=Homo sapiens GN=RIPK3 PE=1 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.792e-11
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 3
Query:   18 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV-TTRVMGTFGYVAPEY-------ASTGMLNERSDVYSFGILIMEVISGR 257
            P ++HRD+K SN+LLD + + KL+DFGL+   G  +S   +    GT GY+APE        AST      SDVYSFGIL+  V++GR
Sbjct:  136 PVLLHRDLKPSNVLLDPELHVKLADFGLSTFQGGSQSGTGSGEPGGTLGYLAPELFVNVNRKASTA-----SDVYSFGILMWAVLAGR 218          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: PK1_STRTO (Serine/threonine-protein kinase PK-1 OS=Streptomyces toyocaensis GN=spk1 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.792e-11
Identity = 33/85 (38.82%), Postives = 50/85 (58.82%), Query Frame = 3
Query:   27 VHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 281
            VHRD+K  N+L+      K++DFGL + + +  +  T  V+GT  Y+APE    G  + R DVY+ GIL+ E+++G  P D   P
Sbjct:  138 VHRDMKPENVLIGDDGRVKVADFGLVRAVDSVTN-TTGTVLGTVSYLAPEQIEHGTADPRVDVYACGILLYEMLTGEKPHDGDSP 221          
The following BLAST results are available for this feature:
BLAST of CX287340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
PKN1_COREF7.498e-1136.26Probable serine/threonine-protein kinase CE0033 OS... [more]
NEK2_HUMAN7.498e-1144.59Serine/threonine-protein kinase Nek2 OS=Homo sapie... [more]
KPEL_DROME7.498e-1137.96Serine/threonine-protein kinase pelle OS=Drosophil... [more]
GEFX_DICDI7.498e-1139.51RasGEF domain-containing serine/threonine-protein ... [more]
DRKD_DICDI7.498e-1139.24Probable serine/threonine-protein kinase drkD OS=D... [more]
Y2350_DICDI9.792e-1142.50Probable serine/threonine-protein kinase DDB_G0292... [more]
SKM1_YEAST9.792e-1135.82Serine/threonine-protein kinase SKM1 OS=Saccharomy... [more]
RIPK3_HUMAN9.792e-1145.45Receptor-interacting serine/threonine-protein kina... [more]
PK1_STRTO9.792e-1138.82Serine/threonine-protein kinase PK-1 OS=Streptomyc... [more]

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Properties
Property NameValue
Genbank descriptionC01008E02SK Veg1 Citrus clementina cDNA clone C01008E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287340 ID=CX287340; Name=CX287340; organism=Citrus clementina; type=EST; length=415bp
TGCATGAGGGGCTTGAACCAAAGGTTGTTCACCGTGACATCAAGTCAAGC
AACATTTTGCTCGATAAGCAGTGGAATCCGAAATTATCCGATTTTGGCCT
AGCAAAGCTTTTGGGCGCAGAGAGGAGCTACGTGACAACTCGTGTGATGG
GAACATTCGGGTATGTGGCACCAGAATATGCTAGCACTGGGATGTTGAAT
GAAAGAAGCGATGTATACAGTTTTGGTATCCTTATCATGGAAGTAATTTC
TGGTAGAAATCCAGTGGATTACAGCCGCCCTCCAGGGGAGGTGAATTTAG
TTGAGTGGCTCAAAACAATGGTCACAAATCGCAATGCAGAGGGTGTTTTG
GATCCTAGGTTGCAAGAGAAGCCTTGTTCAAGGGCATTGAAGCGTGCTCT
TTTAGTAGCTTTACG
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