CX287340

Overview
NameCX287340
Unique NameCX287340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length415
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.032e-24
Identity = 54/134 (40.30%), Postives = 86/134 (64.18%), Query Frame = 3
Query:    9 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVA 410
            G E  ++HRD+KS+NILLD+    K++DFGL+K+   + S ++  + GTFGY+ PEY  T  L E+SDVY+FG++++EV+  R  +D   P  EVNL EW+    +    + +LDP L  +  + +LK+ + +A
Sbjct:  604 GSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEILDPSLIGQIETNSLKKFMEIA 737          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.032e-24
Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G    ++HRDIK+ NILLD+    K++DFG +KL   ++  +TT V GT GY+ PEY +T +LNE+SDVYSFG+++ME+ISG+  + + RP    +LV +            ++D ++  +   R +  A  VA+
Sbjct:  222 HSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAV 358          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.654e-24
Identity = 48/137 (35.04%), Postives = 87/137 (63.50%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H      ++HRDIK++NILLD+    K++DFG ++L+  ++  + T V GT GY+ PEY +TG+LNE+SDVYSFG+++ME++SG+  + + RP    ++V +  +         ++D ++  +   R +++A  +A+
Sbjct:  524 HSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAV 660          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.654e-24
Identity = 56/116 (48.28%), Postives = 83/116 (71.55%), Query Frame = 3
Query:   21 KVVHRDIKSSNILLDKQWNPKLSDFGLAKL-LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV-TNRNAEGVLDPRL 362
            +V++RD K++NILLD ++N KLSDFGLAK     ++++V+T+VMGT GY APEY +TG L  +SDVYSFG++++E++SGR  VD S+   E +LV+W    +   R    ++D RL
Sbjct:  211 QVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRL 326          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.467e-24
Identity = 47/130 (36.15%), Postives = 86/130 (66.15%), Query Frame = 3
Query:   24 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            ++HRD+K++NILLD+    K++DFG ++L+  ++  +TT V GT GY+ PEY +TG+LNE+SDVYSFG+++ME++SG   + + RP    +LV +  + +       ++D ++  +   R ++ +  +A+
Sbjct:  529 IIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAV 658          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.467e-24
Identity = 53/119 (44.54%), Postives = 81/119 (68.07%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV-TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP 356
            H+     ++HRD+K+SNILLD   NPKL+DFGLA++ G +++   T+R++GTFGY+APEYA  G  + +SDVYSFG+L++E+ISG+    +    G  +LV     + +N  A  ++DP
Sbjct:  451 HQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHAWRLWSNGTALDLVDP 569          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.528e-24
Identity = 56/138 (40.58%), Postives = 95/138 (68.84%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G +P +VHRD+K++NILL++  + KL+DFGL++    E  ++V+T V GT GY+ PEY  T  LNE+SDVYSFGI+++E+I+ +  ++ SR   + ++ EW+  M+T  + + ++DP+L     S ++ RA+ +A+
Sbjct:  706 HNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSRE--KPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAM 841          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.913e-24
Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSR--PPGEVNLVEWLKTMVTNRNAEGVLDPRL 362
            H G++P + HRDIK +NILLD     +++DFGLAK      S++TTRV GT GY+APEYA  G L E+SDVYSFG++I+E++ GR  +D S    P    + +W  ++V     E  L+  L
Sbjct:  415 HYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKAGKTEEALEQSL 536          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.913e-24
Identity = 53/126 (42.06%), Postives = 81/126 (64.29%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL---LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK 371
            H  + P + HRDIKSSNILLD ++N K+SDFGL++L      E S+++T   GT GY+ P+Y     L+++SDVYSFG++++E+ISG   +D++RP  EVNL       +       ++DP L ++
Sbjct:  426 HSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRVVDIIDPCLNKE 551          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 5.913e-24
Identity = 57/139 (41.01%), Postives = 87/139 (62.59%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR-VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISG-RNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H+     ++HRD+K+SNILLD   NPK++DFG+A++ G ++S   TR + GTFGY++PEYA  G  + +SDVYSFG+L++E+ISG +N   Y+      NLV     +  N +   ++DP + E   S    R + +AL
Sbjct:  459 HQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIAL 597          
The following BLAST results are available for this feature:
BLAST of CX287340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
Y2232_ARATH2.032e-2440.30Probable receptor-like protein kinase At2g23200 OS... [more]
WAKLS_ARATH2.032e-2438.69Putative wall-associated receptor kinase-like 16 O... [more]
WAK4_ARATH2.654e-2435.04Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
APK2B_ARATH2.654e-2448.28Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
WAK5_ARATH3.467e-2436.15Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
CRK15_ARATH3.467e-2444.54Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
RLK6_ARATH4.528e-2440.58Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y1105_ARATH5.913e-2445.08Probable receptor-like protein kinase At1g11050 OS... [more]
WAKLR_ARATH5.913e-2442.06Wall-associated receptor kinase-like 21 OS=Arabido... [more]
CRK35_ARATH5.913e-2441.01Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC01008E02SK Veg1 Citrus clementina cDNA clone C01008E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287340 ID=CX287340; Name=CX287340; organism=Citrus clementina; type=EST; length=415bp
TGCATGAGGGGCTTGAACCAAAGGTTGTTCACCGTGACATCAAGTCAAGC
AACATTTTGCTCGATAAGCAGTGGAATCCGAAATTATCCGATTTTGGCCT
AGCAAAGCTTTTGGGCGCAGAGAGGAGCTACGTGACAACTCGTGTGATGG
GAACATTCGGGTATGTGGCACCAGAATATGCTAGCACTGGGATGTTGAAT
GAAAGAAGCGATGTATACAGTTTTGGTATCCTTATCATGGAAGTAATTTC
TGGTAGAAATCCAGTGGATTACAGCCGCCCTCCAGGGGAGGTGAATTTAG
TTGAGTGGCTCAAAACAATGGTCACAAATCGCAATGCAGAGGGTGTTTTG
GATCCTAGGTTGCAAGAGAAGCCTTGTTCAAGGGCATTGAAGCGTGCTCT
TTTAGTAGCTTTACG
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