CX287340

Overview
NameCX287340
Unique NameCX287340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length415
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.009e-23
Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL--LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQE 368
            H G  P +VHRDIK++NILLD+    KL+DFGL++   +G E++ V+T V GT GY+ PEY  T  L E+SD+YSFGI+++E+IS R  +  SR   + ++VEW+  M+T  +   ++DP L +
Sbjct:  691 HTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKN-VSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSRE--KPHIVEWVSFMITKGDLRSIMDPNLHQ 811          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.009e-23
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL-LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKR 395
            H G +  ++HRD+K++NIL+D+ W  K+SDFGL+K        +VTT V G+FGY+ PEY     L E+SDVYSFG+++ E++  R  ++ S P  +V+L +W        N E ++DP L+ K  +  LK+
Sbjct:  630 HTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNLKGKINAECLKK 761          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.317e-23
Identity = 51/121 (42.15%), Postives = 85/121 (70.25%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL 362
            H G  P +VHRD+K++NILL++++  KL+DFGL++    +  S+V+T V GT GY+ PEY  T  L+E+SDVYSFG++++E+++ +   D +R    +N  EW+ +M+T  + + +LDP+L
Sbjct:  679 HNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRERTHIN--EWVGSMLTKGDIKSILDPKL 797          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.317e-23
Identity = 51/132 (38.64%), Postives = 83/132 (62.88%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL-LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKR 395
            H G E  ++HRD+K++NILLD+ +  K+SDFGL+K     + ++V+T V G+FGY+ PEY     L E+SDVYSFG+++ E +  R  ++ + P  ++NL EW  +    RN E ++D  L+      +L++
Sbjct:  633 HTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEK 764          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.317e-23
Identity = 53/136 (38.97%), Postives = 87/136 (63.97%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVA 410
            H+  EP V+HRD+KSSNILLD+++   L+DFGLA+LL    ++VTT ++GT GY+ PEY+ + +   R DVYSFG++++E+++GR PV+  +     +LV  +  M   +    ++D  ++E    R +   L +A
Sbjct:  869 HKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIA 1004          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.317e-23
Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP 356
            H    P+++HRD+KSSNILLDK    +L+DFG+AK L   +S+ +T VMGT GY+ PEYA T  L E+SDVYS+GI+++E+++ R  VD      E NL   + +   N     + DP
Sbjct:  762 HHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVD-----DESNLHHLIMSKTGNNEVMEMADP 874          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.317e-23
Identity = 51/123 (41.46%), Postives = 81/123 (65.85%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEW--LKTMVTNRNAEGVLDPRLQ 365
            H G E K++HRDIK+SNILLD+  +PK++DFGL + +G +++   T + GT GY+APEY   G L E++DVY+FG+LI+E+++G+    +++    V    W   K    +R+    +DPRL+
Sbjct:  432 HRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRS----IDPRLK 550          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.317e-23
Identity = 51/128 (39.84%), Postives = 86/128 (67.19%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV-TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSR 383
            H+     ++HRD+K+SNILLD   NPK++DFG+A++ G +++   T+R++GT+GY++PEYA  G  + +SDVYSFG+L++E+ISG+    + +  G  +LV +   + +N     ++DP + E  C R
Sbjct:  451 HQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVEN-CQR 577          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.721e-23
Identity = 58/139 (41.73%), Postives = 91/139 (65.47%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL--LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G  P +VHRDIK++NILLD+Q   KL+DFGL++   +G E ++++T V GT GY+ PEY  T  L E+SDVYSFGI+++E+I+ +  +D SR    ++  +W+   +T  +   ++DP L     SR++ R L +A+
Sbjct:  693 HSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGE-THISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSHIS--QWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAM 828          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.721e-23
Identity = 52/139 (37.41%), Postives = 88/139 (63.31%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR-VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV-NLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H+     ++HRD+K+ NILLD   NPK++DFG+A++ G +++   TR V+GT+GY+APEYA  G  + +SDVYSFG+L++E++SG       +  G + NLV +   + +N +   ++DP   +   +  + R + +AL
Sbjct:  458 HQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIAL 596          
The following BLAST results are available for this feature:
BLAST of CX287340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
Y2899_ARATH1.009e-2345.16Probable leucine-rich repeat receptor-like protein... [more]
ANX1_ARATH1.009e-2340.15Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y5188_ARATH1.317e-2342.15Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH1.317e-2338.64Probable receptor-like protein kinase At1g30570 OS... [more]
PSKR2_ARATH1.317e-2338.97Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
ERECT_ARATH1.317e-2344.92LRR receptor-like serine/threonine-protein kinase ... [more]
CRK1_ARATH1.317e-2341.46Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
CRK10_ARATH1.317e-2339.84Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
PAM74_ARATH1.721e-2341.73Probable LRR receptor-like serine/threonine-protei... [more]
CRK20_ARATH1.721e-2337.41Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC01008E02SK Veg1 Citrus clementina cDNA clone C01008E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287340 ID=CX287340; Name=CX287340; organism=Citrus clementina; type=EST; length=415bp
TGCATGAGGGGCTTGAACCAAAGGTTGTTCACCGTGACATCAAGTCAAGC
AACATTTTGCTCGATAAGCAGTGGAATCCGAAATTATCCGATTTTGGCCT
AGCAAAGCTTTTGGGCGCAGAGAGGAGCTACGTGACAACTCGTGTGATGG
GAACATTCGGGTATGTGGCACCAGAATATGCTAGCACTGGGATGTTGAAT
GAAAGAAGCGATGTATACAGTTTTGGTATCCTTATCATGGAAGTAATTTC
TGGTAGAAATCCAGTGGATTACAGCCGCCCTCCAGGGGAGGTGAATTTAG
TTGAGTGGCTCAAAACAATGGTCACAAATCGCAATGCAGAGGGTGTTTTG
GATCCTAGGTTGCAAGAGAAGCCTTGTTCAAGGGCATTGAAGCGTGCTCT
TTTAGTAGCTTTACG
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