CX287340

Overview
NameCX287340
Unique NameCX287340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length415
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.833e-23
Identity = 54/138 (39.13%), Postives = 86/138 (62.32%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK----PCSRALKRALL 404
            HE    +++HRDIK SNILL+  + P+++DFGLA+L   ++++++T + GT GY+APEY   G L E++DVYSFG+L++EVI+G+    + +  G +    W  ++    N E  +DP L +       SR L+  LL
Sbjct:  437 HEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVW--SLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLL 572          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.006e-23
Identity = 53/138 (38.41%), Postives = 91/138 (65.94%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G  P +VHRD+K +NILL+++   KL+DFGL++    +  S+V T V GT GY+ PEY  T  L+E+SDVYSFG++++E+++ +  ++ +R    +N  EW+  M+TN + + ++DP+L E   +  + + + +AL
Sbjct:  683 HNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRERPHIN--EWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELAL 818          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.006e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 3
Query:   21 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVA 410
            K++HRD+KS+NILLD+ +N K++DFGL++L   ++++V+T   GT GYV P+Y     L+ +SDVYSF +++ME+IS    VD +RP  E+NL       + N     ++DP L     +R  +  + VA
Sbjct:  463 KIIHRDVKSNNILLDQNFNVKVADFGLSRLFPMDKTHVSTAPQGTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISSLPAVDITRPRQEINLSNMAVVKIQNHELRDMVDPSLGFDTDTRVRQTVIAVA 592          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.006e-23
Identity = 50/120 (41.67%), Postives = 79/120 (65.83%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL 362
            H  + P + HRDIKS+NILLD  +N K++DFGL++L   E S+++T   GT GY+ P+Y     L+++SDVYSFG+++ E+I+G   VD++RP  E+NL       + +   + ++DP L
Sbjct:  461 HSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEINLAALAVDKIGSGCIDEIIDPIL 580          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.006e-23
Identity = 55/137 (40.15%), Postives = 78/137 (56.93%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            HE  E  V+HRD+K SN+L+D   NP+L DFGLA+L        TT V+GT GY+APE A  G  +  SDV++FG+L++E++SGR P D     G   + +W+  +  +      +DPRL         + AL V L
Sbjct:  480 HEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTD----SGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGL 612          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.006e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK 371
            H G   +++HRDIK+SN+LLD Q NPK++DFGLA+  G ++++++T + GT GY+APEY   G L E++DVYSFG+L++E+  G     +    G  +L++ +  + T       LDP L+++
Sbjct:  429 HGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFVPETG--HLLQRVWNLYTLNRLVEALDPCLKDE 549          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.538e-23
Identity = 54/135 (40.00%), Postives = 84/135 (62.22%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG----VLDPRLQEKPCSRALK 392
            HE  + +++HRD+K+SNILLD + NPK++DFG+A+L   + +   T+RV+GT+GY+APEY   G  + +SDVYSFG++++E+ISG    ++          E L      R  EG    ++DP L E P +  +K
Sbjct:  454 HEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKNKNFE--------TEGLPAFAWKRWIEGELESIIDPYLNENPRNEIIK 580          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.538e-23
Identity = 55/143 (38.46%), Postives = 88/143 (61.54%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRN-----PVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H+    K++HRD+K+SNILLD   NPK++DFGLA + G E++   T R+ GT+ Y++PEYA  G  + +SD+YSFG+L++E+ISG+       +D +   G  NLV +   +  N++   ++DP       S  + R + +AL
Sbjct:  464 HQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAG--NLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIAL 604          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.539e-23
Identity = 55/139 (39.57%), Postives = 91/139 (65.47%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL--LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G +P ++HRDIKS NILLD  +  KL DFGL++   +G+E ++V+T V G+ GY+ PEY  T  L E+SDV+SFG++++E+I+ +  +D +R    +   EW+   +TN + + ++DP +     S +L +AL +A+
Sbjct:  705 HIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSE-THVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIG--EWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAM 840          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 8.539e-23
Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY--VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL-KTMVTNRNAEGVLDPRLQEKP 374
            H    P ++HRD+K +NILLD ++   L+DFGLAKL+    +Y    +RV G++GY+APEY  T  + E+SDVYS+G++++E++SGR+ V+     G +++VEW+ K M T   A  VLD +LQ  P
Sbjct:  889 HHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIGDG-LHIVEWVKKKMGTFEPALSVLDVKLQGLP 1014          
The following BLAST results are available for this feature:
BLAST of CX287340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
CRK3_ARATH3.833e-2339.13Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y5189_ARATH5.006e-2338.41Probable LRR receptor-like protein kinase At1g5189... [more]
Y1839_ARATH5.006e-2340.00Probable serine/threonine-protein kinase At1g18390... [more]
WAKLO_ARATH5.006e-2341.67Wall-associated receptor kinase-like 14 OS=Arabido... [more]
LRKA3_ARATH5.006e-2340.15Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK42_ARATH5.006e-2340.65Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK36_ARATH6.538e-2340.00Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK11_ARATH6.538e-2338.46Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y4245_ARATH8.539e-2339.57Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH8.539e-2344.09Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC01008E02SK Veg1 Citrus clementina cDNA clone C01008E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287340 ID=CX287340; Name=CX287340; organism=Citrus clementina; type=EST; length=415bp
TGCATGAGGGGCTTGAACCAAAGGTTGTTCACCGTGACATCAAGTCAAGC
AACATTTTGCTCGATAAGCAGTGGAATCCGAAATTATCCGATTTTGGCCT
AGCAAAGCTTTTGGGCGCAGAGAGGAGCTACGTGACAACTCGTGTGATGG
GAACATTCGGGTATGTGGCACCAGAATATGCTAGCACTGGGATGTTGAAT
GAAAGAAGCGATGTATACAGTTTTGGTATCCTTATCATGGAAGTAATTTC
TGGTAGAAATCCAGTGGATTACAGCCGCCCTCCAGGGGAGGTGAATTTAG
TTGAGTGGCTCAAAACAATGGTCACAAATCGCAATGCAGAGGGTGTTTTG
GATCCTAGGTTGCAAGAGAAGCCTTGTTCAAGGGCATTGAAGCGTGCTCT
TTTAGTAGCTTTACG
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