CX287341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287341 vs. ExPASy Swiss-Prot
Match: NFYC_BOVIN (Nuclear transcription factor Y subunit gamma OS=Bos taurus GN=NFYC PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.745e-34 Identity = 69/103 (66.99%), Postives = 84/103 (81.55%), Query Frame = 1 Query: 94 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIK 396 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of CX287341 vs. ExPASy Swiss-Prot
Match: NFYC6_ARATH (Nuclear transcription factor Y subunit C-6 OS=Arabidopsis thaliana GN=NFYC6 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.526e-32 Identity = 64/97 (65.98%), Postives = 83/97 (85.57%), Query Frame = 1 Query: 100 SYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDE 390 +Y +++E +DFKN QLPLARIKKIMKAD DV M+SAEAPI+FAKACE+FI++LT+RSWL AEENKR TLQK+DI+ A+ + +DFL+D+VP+DE Sbjct: 38 NYWIEQMETVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPKDE 134
BLAST of CX287341 vs. ExPASy Swiss-Prot
Match: HAP5_YEAST (Transcriptional activator HAP5 OS=Saccharomyces cerevisiae GN=HAP5 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.688e-31 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 1 Query: 94 FWSYQRQEIEQAN--------DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 384 +W EIE N DFK+H LP ARI+K+MK DEDV+MISAEAPI+FAKACE+FI ELT+R+W AE NKRRTLQK DIA A+ ++D+FDFL+D+VPR Sbjct: 133 YWQELINEIESTNEPGSEHQDDFKSHSLPFARIRKVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQKSDMFDFLIDVVPR 237
BLAST of CX287341 vs. ExPASy Swiss-Prot
Match: NFYC8_ARATH (Nuclear transcription factor Y subunit C-8 OS=Arabidopsis thaliana GN=NFYC8 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.636e-28 Identity = 59/93 (63.44%), Postives = 77/93 (82.80%), Query Frame = 1 Query: 94 FWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVD 372 FWS +E+E DFKNH LP+ RIKKIMK D DV MI++EAPIL +KACE+FI++LT+RSWLHA+E+KR TLQK+++ AA+ +T IFDFL+D Sbjct: 21 FWS---KEMEGNLDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLD 110
BLAST of CX287341 vs. ExPASy Swiss-Prot
Match: NFYC5_ARATH (Nuclear transcription factor Y subunit C-5 OS=Arabidopsis thaliana GN=NFYC5 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.059e-25 Identity = 54/99 (54.55%), Postives = 78/99 (78.79%), Query Frame = 1 Query: 94 FWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDE 390 FWS + +E + KNH+ P++RIK+IMK D DV MI+AEAP L +KACE+F+++LT+RSWLHA+E+ R T++K+D+ A +++T IFDFL D VP+DE Sbjct: 21 FWS---KGMEGDLNVKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRLTIRKSDVDAVVSQTVIFDFLRDDVPKDE 116
BLAST of CX287341 vs. ExPASy Swiss-Prot
Match: HAP5_SCHPO (Transcriptional activator hap5 OS=Schizosaccharomyces pombe GN=hap5 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.969e-25 Identity = 52/85 (61.18%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 139 KNHQLPLARIKKIMKADEDVR--MISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD 387 K LPLARIKK+MK D+DV+ MISAEAP LFAK E+FI ELT+R+WLHA++N+RRTLQ++DIA A+++++++DFL+DI+ +D Sbjct: 105 KTLHLPLARIKKVMKTDDDVKNKMISAEAPFLFAKGSEIFIAELTMRAWLHAKKNQRRTLQRSDIANAVSKSEMYDFLIDIISKD 189
BLAST of CX287341 vs. ExPASy Swiss-Prot
Match: NFYC7_ARATH (Nuclear transcription factor Y subunit C-7 OS=Arabidopsis thaliana GN=NFYC7 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.870e-22 Identity = 52/102 (50.98%), Postives = 73/102 (71.57%), Query Frame = 1 Query: 100 SYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ------KNDIAAAITRTDIFDFLVDIVPRD 387 +Y ++ A D K+H PL RIKKIMK++ +V M++AEAP+L +KACE+ IL+LT+RSWLH E R+TL+ ++DI+AA TR+ F FL D+VPRD Sbjct: 47 NYWIAQMGNATDVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMRSWLHTVEGGRQTLKRSDTLTRSDISAATTRSFKFTFLGDVVPRD 148
BLAST of CX287341 vs. ExPASy Swiss-Prot
Match: NFYCA_ARATH (Nuclear transcription factor Y subunit C-10 OS=Arabidopsis thaliana GN=NFYC10 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.935e-19 Identity = 42/97 (43.30%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 91 MFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 381 +FW+ QR+++ N LPL+R++KI+K+D +V+ IS + P LF+KACE FILE+T+R+W+H + R T+++ DI A+ + +DFL+D VP Sbjct: 50 VFWNNQREQL--GNFAGQTHLPLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRVP 144 The following BLAST results are available for this feature:
BLAST of CX287341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287341 ID=CX287341; Name=CX287341; organism=Citrus clementina; type=EST; length=400bpback to top |