CX287348

Overview
NameCX287348
Unique NameCX287348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 4.271e-43
Identity = 86/168 (51.19%), Postives = 104/168 (61.90%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCL 505
            N  AN+LFLE+P GVGFSYTN S DL   GD+ TA ++  FLI W  RFP ++  DFYI GESYAGHYVPQLA+ IH  N        INLKGFM+GN  ++   D  G   YAWSHA+ISDK YK I K C F        CN  +      + +++ YSIYSP C+
Sbjct:  116 NTEANILFLESPAGVGFSYTNTSSDLKDSGDERTAQENLIFLIKWMSRFPQYQYRDFYIVGESYAGHYVPQLAKKIHLYNKAFNNTPIINLKGFMVGNGDMDKHYDRLGAAMYAWSHAMISDKTYKSILKHCSFTADKTSDKCNWALYFAYREFGKVNGYSIYSPSCV 283          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.243e-42
Identity = 86/168 (51.19%), Postives = 110/168 (65.48%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRS-NCNDHIRGFVEAYAEIDIYSIYSPVC 502
            NK AN+LFLE+P GVGFSY+N + DL+  GDQ TA DSY FL+ WF+RFP +K  +FYI GESYAGH+VPQL++L+HERN +  K+  INLKGFM+GNAV +D  D  G  +Y W+H +ISD  Y  +   C    S   S  C   +R        ID YSI++  C
Sbjct:  122 NKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVPQLSKLVHERN-KGFKNPAINLKGFMVGNAVTDDYHDYIGTFEYWWNHGLISDSTYHQLKTACYSVSSQHPSMQCMVALRNAELEQGNIDPYSIFTKPC 288          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.243e-42
Identity = 84/168 (50.00%), Postives = 112/168 (66.67%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEA-YAEIDIYSIYSPVC 502
            NK AN+LFL++P GVGFSYTN S D++  GD  TA+DSYAFL  WF+RFP++K  DFYIAGESYAGHYVP+L++L+H       K+  INLKGFM+GN +I+D  D  G  ++ W+H I+SD  Y+ + + C     +  S   D       A    ID+YS+Y+PVC
Sbjct:   96 NKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHR-----SKNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATAEQGNIDMYSLYTPVC 258          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 2.769e-42
Identity = 93/186 (50.00%), Postives = 120/186 (64.52%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAE--LIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDF---GQSMIRSNC---NDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPK 535
            N AAN+LFLE+P GVGFSYTN + DL K GD+ TA D+Y FL+ W +RFP +K  D YIAGESYAGHYVPQLA   L+H R       SF NLKG +IGNAVIND TD  G+ D+  SHA+IS+     +   CD      S++   C   +D I   ++ Y  +DIY+IY+P+CL+S   + P +
Sbjct:  167 NNAANVLFLESPAGVGFSYTNTTSDLEKHGDRNTAADNYIFLVNWLERFPEYKGRDLYIAGESYAGHYVPQLAHTILLHHR-------SFFNLKGILIGNAVINDETDLMGMYDFFESHALISEDSLARLKSNCDLKTESASVMTEECAVVSDQID--MDTY-YLDIYNIYAPLCLNSTLTRRPKR 342          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.616e-42
Identity = 91/171 (53.22%), Postives = 115/171 (67.25%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ--SMIRSN--CNDHIRGFVEAYAEIDIYSIYSPVC 502
            N AAN+LFLE+P GVG+SY+N + D  + GD  TA D+Y FL  W +RFP +K  +FYI GESYAGHYVPQLA  I      A  D  INLKG MIGNAVIND TD+KG+ D+ W+HA+ISD+    ISK C+F    + + SN  C+       E+ A+IDIY+IY+P C
Sbjct:  174 NHAANVLFLESPAGVGYSYSNTTADYGRSGDNGTAEDAYQFLDNWLERFPEYKGREFYITGESYAGHYVPQLAHAILR---HASPD--INLKGIMIGNAVINDWTDSKGMYDFFWTHALISDETADGISKNCNFTAYGAGVASNALCDAASDEVGESLADIDIYNIYAPNC 339          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.374e-41
Identity = 83/168 (49.40%), Postives = 113/168 (67.26%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEA-YAEIDIYSIYSPVC 502
            NK AN+LFL++P GVGFSYTN S D++  GD  TA+DSYAFL  WF+RFP++K  +FY+AGESYAGHYVP+L++L+H    R+G +  INLKGFM+GN +I+D  D  G  ++ W+H I+SD  Y+ +   C     +  S   D       A    ID+YS+Y+PVC
Sbjct:  128 NKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAAWFERFPHYKYREFYVAGESYAGHYVPELSQLVH----RSG-NPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKDACLHDSFIHPSPACDAATDVATAEQGNIDMYSLYTPVC 290          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 6.819e-41
Identity = 85/174 (48.85%), Postives = 105/174 (60.34%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCND-HIRGFVEAYAEIDIYSIYSPVCLDSLDG 520
            N  +N+LFLEAP GVGFSYTN S DL   GD+ TA DS  FLI W  RFP +   + YI GESYAGHYVPQLA+ I   N R+     +NLKG M+GNAV ++  D  G V Y WSHA+ISD+ Y  +   CDF +      C   +     + +  ID Y+IY+P C  S DG
Sbjct:  123 NSISNLLFLEAPAGVGFSYTNRSSDLFNTGDRRTAKDSLQFLIQWLHRFPRYNHREIYITGESYAGHYVPQLAKEIMNYNKRSKNP--LNLKGIMVGNAVTDNHYDNLGTVSYWWSHAMISDRTYHQLISTCDFSRQKESDECETLYSYAMEQEFGNIDQYNIYAPPCNKSSDG 294          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.519e-40
Identity = 84/170 (49.41%), Postives = 114/170 (67.06%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSN--CNDHIRGFVEAYAEIDIYSIYSPVCL 505
            N+AAN+LFL+APVGVG+SY+N S DL   GD+ TA DS  FL+ W +RFP +K  DFYI GESYAGHY+PQL+E I + N  + K+S INLKG+M+GN +++D  D  GL  Y WS   ISD+ Y  +  +C F +S I S+  CN  +    +    ID YS+++P C+
Sbjct:  124 NQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHYIPQLSEAIVKHNQGSDKNS-INLKGYMVGNGLMDDFHDRLGLFQYIWSLGFISDQTYSLLQLQCGF-ESFIHSSKQCNKILEIADKEIGNIDQYSVFTPACV 291          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.857e-38
Identity = 82/171 (47.95%), Postives = 110/171 (64.33%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYA-EIDIYSIYSPVCLDS 511
            N+ AN+LFL++PVGVG+SY+N S D+   GD+ TA DS  FL  W +RFP +K  +FY+ GESYAGHYVPQLA+ I +R+  A  D  INLKG+M+GNA+ +D  D  G+  Y W+  +ISD+ YK ++  CDF   +  S   D I       A  ID YSI++P C  S
Sbjct:   87 NQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTGESYAGHYVPQLAQAI-KRHHEATGDKSINLKGYMVGNALTDDFHDHYGIFQYMWTTGLISDQTYKLLNIFCDFESFVHTSPQCDKILDIASTEAGNIDSYSIFTPTCHSS 256          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.872e-36
Identity = 74/172 (43.02%), Postives = 103/172 (59.88%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAE--LIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCLDS 511
            N  AN+LFLE+PVG GFSYTN   DL   GD   A D Y FL+ W +RFP +K  +FYIAGESYAGHYVPQLA+  L+H +N      +FINL+G +IGN  +ND  +T G  DY  SHA++S        + C      +  +C        +   ++++Y+I +P C+++
Sbjct:  164 NNVANILFLESPVGTGFSYTNTESDLENPGDMKAAADKYIFLVKWLERFPEYKGREFYIAGESYAGHYVPQLAQTILVHNKN-----QNFINLRGILIGNPTLNDIVETTGSFDYLVSHALLSQDSLLSYKENCATDTPKMEVDCIALSMKIDDDIKKMNLYNILTPTCINA 330          
The following BLAST results are available for this feature:
BLAST of CX287348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
SCP23_ARATH4.271e-4351.19Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP27_ARATH1.243e-4251.19Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
CBP2_WHEAT1.243e-4250.00Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP40_ARATH2.769e-4250.00Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
CBP23_HORVU3.616e-4253.22Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
CBP2_HORVU1.374e-4149.40Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP25_ARATH6.819e-4148.85Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP29_ARATH1.519e-4049.41Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
CBP22_HORVU1.857e-3847.95Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP39_ARATH3.872e-3643.02Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC01008E11SK Veg1 Citrus clementina cDNA clone C01008E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287348 ID=CX287348; Name=CX287348; organism=Citrus clementina; type=EST; length=568bp
GAACAAAGCTGCCAATATGCTGTTCTTGGAGGCTCCAGTGGGTGTAGGCT
TTTCATACACCAACAATTCTGAAGATTTACATAAACTTGGCGATCAAGTT
ACAGCAAATGATTCTTATGCATTCTTGATTGGATGGTTCAAAAGATTTCC
AAACTTCAAATCCCATGACTTTTACATTGCTGGAGAAAGCTATGCCGGTC
ATTATGTTCCTCAACTTGCTGAGCTCATTCACGAAAGAAACATAAGAGCT
GGCAAAGACTCATTTATAAATCTTAAGGGTTTCATGATAGGGAATGCCGT
GATCAATGATCCAACGGACACCAAAGGGCTAGTGGATTATGCATGGAGTC
ATGCAATTATATCAGACAAACTCTACAAAGATATAAGCAAGGAATGTGAT
TTTGGGCAAAGCATGATAAGAAGCAATTGCAATGATCATATCAGAGGCTT
TGTTGAAGCTTATGCTGAAATTGACATCTACAGCATTTACTCTCCAGTTT
GTTTGGATTCTCTTGATGGTAAAGCTCCTCCAAAACTGATGGTCGCCCCT
CATCTCCTGACTCAACAT
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