CX287348

Overview
NameCX287348
Unique NameCX287348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.585e-29
Identity = 73/197 (37.06%), Postives = 109/197 (55.33%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIR--SNCNDHIRGFVEAYAEIDIYSIYSPVC----------LDSLDGK-APPKLMVAPH 553
            NKAAN+LF E+P GV FSY+N S DL  +GD   A D+Y FL+ WF+RFP++   +FYIAGES  GH++PQL+++++          FIN +G ++ + + ND  D  G+ +  W H +ISD+      K C  G S +     C +     +     I+ Y+IY+P C            +  G+ APP LM+ P+
Sbjct:  152 NKAANILFAESPAGVVFSYSNTSSDL-SMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES--GHFIPQLSQVVYRNR---NNSPFINFQGLLVSSGLTNDHEDMIGMFELWWHHGLISDETRDSGLKVCP-GTSFMHPTPECTEVWNKALAEQGNINPYTIYTPTCDREPSPYQRRFWAPHGRAAPPPLMLPPY 341          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 6.620e-28
Identity = 68/190 (35.79%), Postives = 113/190 (59.47%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECD-----FGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSP----VCLDSLDGKAPPKLMV 544
            +K +N+++L++PVGVGFSY+N++ D +   D  TA+D++ FL+ WFK FP F+S+ F+I+GESYAG YVP LA  + + +    K   IN KG+++GN V ++  D   LV +     +ISD+LY++    C+      GQS +   C   ++   +    +++Y+I  P      L +LD +  PK ++
Sbjct:  118 SKVSNIIYLDSPVGVGFSYSNDNAD-YTTDDTKTASDTHTFLLEWFKMFPEFQSNPFFISGESYAGIYVPTLAAEVVKGHKNVTK-PVINFKGYLVGNGVTDEVFDGNALVPFTHGMGLISDELYEETKLVCNGTYYTGGQSGVSKECAGKLKTVSDTVNLLNLYNILEPCYHGTSLSALDIEFLPKSLL 305          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 8.646e-28
Identity = 65/166 (39.16%), Postives = 102/166 (61.45%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRS-NCNDHIRGFVEAYAEIDIYSIYSP 496
            +K +N+++L++PVGVGFSY+NN  D +  GD  TA DS+AFL+ WF+ FP F+S+ F+I+GESYAG YVP LA  +   N + G    +N KG+++GN V +   D    V +A    +ISD+L+++++K C      I    C +      +   +++IY+I  P
Sbjct:  125 SKVSNIIYLDSPVGVGFSYSNNKSD-YITGDIKTAVDSHAFLLKWFQMFPEFQSNPFFISGESYAGVYVPTLASEVVIGN-KNGVKPALNFKGYLVGNGVADPKFDGNAFVPFAHGMGLISDELFENVTKACKGNFYEIEGLECEEQYTKVNDDTNQLNIYNILEP 288          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 119.783 bits (299), Expect = 9.560e-27
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ-SMIRSNCNDHIRGFVEAYAEIDIYSIYSP 496
            +K + M++L++P GVG SY+ N  D ++ GD  TA DS+ FL+ WF+ +P F S+ FYIAGESYAG YVP L+  +  + I+ G    IN KG+M+GN V +   D   LV +A    +ISD++Y+  S  C     +     C+  I       + ++IY I  P
Sbjct:  127 SKVSTMIYLDSPAGVGLSYSKNVSD-YETGDLKTATDSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLSHEV-VKGIQGGAKPTINFKGYMVGNGVCDTIFDGNALVPFAHGMGLISDEIYQQASTSCHGNYWNATDGKCDTAISKIESLISGLNIYDILEP 290          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.380e-25
Identity = 61/166 (36.75%), Postives = 96/166 (57.83%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ-SMIRSNCNDHIRGFVEAYAEIDIYSIYSP 496
            +K +++++L++P GVG SY+ N+ D +  GD  TA DS+ FL+ WF+ +P F S+ FYIAGESYAG YVP L+  +  + +  G    IN KG+M+GN V +   D   LV +A   A+ISD +Y++    C     +     C + +     +  +++IY I  P
Sbjct:  133 SKVSSVIYLDSPAGVGLSYSKNTSD-YNTGDLKTAADSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLSHEV-VKGLHDGVKPTINFKGYMVGNGVCDTVFDGNALVPFAHGMALISDDIYQEAQTACHGNYWNTTTDKCENALYKVDTSINDLNIYDILEP 296          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.803e-25
Identity = 65/175 (37.14%), Postives = 98/175 (56.00%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKE--------CDFGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVC 502
            NK AN+LFLE+P GVG+SY+ N  +L    D+V+ ++ Y  L+ +  +FP +K  DF+I GESYAG Y+P LA       I   K +F N KG  IGN  +N P +   +V + + HA++ D LY DI++         CD        NC D +   ++   E+++Y++Y  VC
Sbjct:  109 NKFANVLFLESPAGVGYSYSTNF-NLTVSDDEVSLHN-YMALLDFLSKFPEYKGRDFWITGESYAGVYIPTLAV-----RILNDKKNFPNFKGVAIGNGALNFPNNYNTMVPFYYYHALVRDDLYNDIARNCCNNNIGTCDIYSKFFDPNCRDKVINALDGTNELNMYNLYD-VC 275          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP48_ARATH (Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana GN=SCPL48 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.878e-23
Identity = 55/130 (42.31%), Postives = 80/130 (61.54%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISK 391
            +KA+N+++++ PVG GFSYT++  DL    D V+ ND Y FL  +FK  P F  +DFYI GESYAGHY+P LA  +H  N +  + + INLKGF IGN + N         DYA    +I+   + ++++
Sbjct:  170 DKASNLIYVDQPVGTGFSYTSDQSDLRHDEDGVS-NDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRVHRGN-KNKEGTHINLKGFAIGNGLTNPEIQYGAYADYALDMNLITQSDHDNLNR 297          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP47_ARATH (Serine carboxypeptidase-like 47 OS=Arabidopsis thaliana GN=SCPL47 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.428e-22
Identity = 64/185 (34.59%), Postives = 97/185 (52.43%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLY----------KDISKECDFGQSMIRSN----CNDHIRGFVEAYAEIDIYSIYSPVCLDSL 514
            +K +N+++++ PVG GFSYT++  D+    D V+ ND Y FL  +FK  P F  +DF+I GESYAGHY+P LA  +H  N +  +   INLKGF IGN + N         DYA    +IS+  +          ++I+K+C  G  ++  +    C       V   + ++ Y I    C+ SL
Sbjct:  167 DKVSNIIYVDQPVGTGFSYTSDESDIRNDEDGVS-NDLYDFLQAFFKEHPKFVKNDFFITGESYAGHYIPALASRVHSGN-KKKEGIPINLKGFAIGNGLTNPEIQYGAYGDYALQMKLISESDHESLKQDYVECQNITKKCSLGGGLVCDSAVEVCTSIFNKIVAKKSGLNYYDIRKK-CVGSL 348          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.437e-22
Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKEC--DFGQSMIRSNCNDHIRGFVEAYAEIDIYSIY 490
            N+ +N+L++E PVGVGFSY+N+++D   L D   A+D    L  +  RFP F   + Y+AGESY G YVP  A  I E N + G+  ++NL G ++GN V +   D+  +      H++IS K Y++  K C  DF  +     C   +     A   I+ Y IY
Sbjct:  101 NRVSNILYIEQPVGVGFSYSNSTDDYQNLNDVQAASDMNNALRDFLTRFPQFIGRETYLAGESYGGVYVPTTAYNIVEGNGK-GQQPYVNLVGILVGNGVTDAEADSNSIPPMMKYHSLISIKYYEEGYKACQGDFYANQNLPACQKFLTDSSNAMGNINPYYIY 264          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBP3_ORYSJ (Serine carboxypeptidase 3 OS=Oryza sativa subsp. japonica GN=CBP3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.089e-22
Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 2
Query:   11 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISK---ECDFGQSMIRSN 427
            +N++F++ P G GFSY+++  D     +   +ND Y+FL  +FK+ P F  +DF+I GESYAGHY+P  A  +H+ N +A +   INLKGF IGN + +     K   DYA    +I    Y  I+K    C+F   +  +N
Sbjct:  158 SNIIFVDQPTGTGFSYSSDDRDTRH-DETGVSNDLYSFLQVFFKKHPEFAKNDFFITGESYAGHYIPAFASRVHQGN-KANEGIHINLKGFAIGNGLTDPAIQYKAYTDYALDMNLIKKSDYDRINKFIPPCEFAIKLCGTN 297          
The following BLAST results are available for this feature:
BLAST of CX287348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
HNLS_SORBI4.585e-2937.06P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
SCP21_ARATH6.620e-2835.79Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP20_ARATH8.646e-2839.16Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
CBP1_HORVU9.560e-2738.55Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
CBP1_ORYSJ1.380e-2536.75Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
YSS2_CAEEL1.803e-2537.14Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
SCP48_ARATH2.878e-2342.31Serine carboxypeptidase-like 48 OS=Arabidopsis tha... [more]
SCP47_ARATH1.428e-2234.59Serine carboxypeptidase-like 47 OS=Arabidopsis tha... [more]
NF314_NAEFO2.437e-2236.36Virulence-related protein Nf314 OS=Naegleria fowle... [more]
CBP3_ORYSJ7.089e-2238.03Serine carboxypeptidase 3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionC01008E11SK Veg1 Citrus clementina cDNA clone C01008E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287348 ID=CX287348; Name=CX287348; organism=Citrus clementina; type=EST; length=568bp
GAACAAAGCTGCCAATATGCTGTTCTTGGAGGCTCCAGTGGGTGTAGGCT
TTTCATACACCAACAATTCTGAAGATTTACATAAACTTGGCGATCAAGTT
ACAGCAAATGATTCTTATGCATTCTTGATTGGATGGTTCAAAAGATTTCC
AAACTTCAAATCCCATGACTTTTACATTGCTGGAGAAAGCTATGCCGGTC
ATTATGTTCCTCAACTTGCTGAGCTCATTCACGAAAGAAACATAAGAGCT
GGCAAAGACTCATTTATAAATCTTAAGGGTTTCATGATAGGGAATGCCGT
GATCAATGATCCAACGGACACCAAAGGGCTAGTGGATTATGCATGGAGTC
ATGCAATTATATCAGACAAACTCTACAAAGATATAAGCAAGGAATGTGAT
TTTGGGCAAAGCATGATAAGAAGCAATTGCAATGATCATATCAGAGGCTT
TGTTGAAGCTTATGCTGAAATTGACATCTACAGCATTTACTCTCCAGTTT
GTTTGGATTCTCTTGATGGTAAAGCTCCTCCAAAACTGATGGTCGCCCCT
CATCTCCTGACTCAACAT
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