CX287348

Overview
NameCX287348
Unique NameCX287348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12523 contig Ccv1_Contig12523:645..1212. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBP3_HORVU (Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 9.259e-22
Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISK---ECDFGQSMIRSN 427
            +K +N++F++ P G GFSY+++  D     +   +ND Y FL  +FK+ P F  +DF+I GESYAGHY+P  A  +H+ N +  + + INLKGF IGN + +     K   DYA    +I    Y+ I+K    C+F   +  +N
Sbjct:  162 DKISNIIFVDQPTGTGFSYSSDDRDTRH-DETGVSNDLYDFLQVFFKKHPEFIKNDFFITGESYAGHYIPAFASRVHQGN-KKNEGTHINLKGFAIGNGLTDPAIQYKAYTDYALEMNLIQKADYERINKFIPPCEFAIKLCGTN 304          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP53_ARATH (Putative serine carboxypeptidase-like 53 OS=Arabidopsis thaliana GN=SCPL53 PE=5 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.518e-21
Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYV 208
            N  ANMLFLE+P G GFSYTN + D+   GD  TA D+Y FL+ W +RFP +K  DFYIAGESYAGHYV
Sbjct:  164 NNVANMLFLESPAGTGFSYTNTTTDMENPGDMKTAADNYVFLVKWLERFPEYKGRDFYIAGESYAGHYV 232          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBPX_ORYSJ (Serine carboxypeptidase-like OS=Oryza sativa subsp. japonica GN=CBP31 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.002e-21
Identity = 49/130 (37.69%), Postives = 76/130 (58.46%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISK 391
            ++ +N+++++ P G GFSY++N  D     +   +ND YAFL  +F   PNF  +DFYI GESYAGHY+P  A  +++ N +  +   INLKGF IGN + +     K   DY+    +I+   +  I+K
Sbjct:   87 DQESNLIYVDQPTGTGFSYSSNPRDTRH-DEAGVSNDLYAFLQAFFTEHPNFAKNDFYITGESYAGHYIPAFASRVYKGN-KNSEGIHINLKGFAIGNGLTDPAIQYKAYTDYSLDMGLITKSQFNRINK 214          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP49_ARATH (Serine carboxypeptidase-like 49 OS=Arabidopsis thaliana GN=SCPL49 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.024e-20
Identity = 50/130 (38.46%), Postives = 74/130 (56.92%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISK 391
            ++ +N+L+++ PVG GFSYT +  D+    +   +ND Y FL  +F   P    +DFYI GESYAGHY+P  A  +H+ N +A +   INLKGF IGN + +         DYA    +I+ K +  + K
Sbjct:  168 DQVSNLLYVDQPVGTGFSYTTDKSDIRH-DETGVSNDLYDFLQAFFAEHPKLAKNDFYITGESYAGHYIPAFASRVHKGN-KANEGVHINLKGFAIGNGLTDPALQYPAYPDYALEMGLITQKEHDRLEK 295          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBP3_WHEAT (Serine carboxypeptidase 3 OS=Triticum aestivum GN=CBP3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.281e-20
Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISK---ECDF 403
            +K +N++F++   G GFSY+++  D     +   +ND Y FL  +FK+ P F  +DF+I GESYAGHY+P  A  +H+ N +  + + INLKGF IGN + +     K   DYA    +I    Y  I+K    C+F
Sbjct:  155 DKISNIIFVDPATGTGFSYSSDDRDTRH-DEAGVSNDLYDFLQVFFKKHPEFVKNDFFITGESYAGHYIPAFASRVHQGN-KKNEGTHINLKGFAIGNGLTDPAIQYKAYTDYALDMNLIQKADYDRINKFIPPCEF 289          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.890e-20
Identity = 48/132 (36.36%), Postives = 75/132 (56.82%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKEC 397
            NK A++L LEAP GVG+SY  ++      GD  TA++++  L+ +F  FP +K +DFY+ GESY G YVP L + I +R       S IN+KG  IGN  ++       LV++ + H ++    ++ +   C
Sbjct:  108 NKNASILTLEAPAGVGYSYATDNNIA--TGDDQTASENWEALVAFFNEFPQYKGNDFYVTGESYGGIYVPTLVQTILDRQ----SQSHINIKGLAIGNGCVSANEGVDSLVNFLYHHGVVDQAKWEHMKTSC 233          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CPVL_PONAB (Probable serine carboxypeptidase CPVL OS=Pongo abelii GN=CPVL PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.132e-19
Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = 2
Query:   14 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERN-IRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIR 445
            +ML+++ PVG GFS+T+++   + + +   A D Y+ LI +F+ FP +K++DFY+ GESYAG YVP +A LIH  N +R  K   INLKG  IG+   +  +   G  ++ +   ++ +K  K   K+C          C +HIR
Sbjct:  147 SMLYIDNPVGTGFSFTDDTHG-YAVNEDDVAQDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLNPVREVK---INLKGIAIGDGYSDPESIIGGYAEFLYQIGLLDEKQKKYFQKQC--------HECIEHIR 279          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CPVL_HUMAN (Probable serine carboxypeptidase CPVL OS=Homo sapiens GN=CPVL PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.931e-19
Identity = 55/157 (35.03%), Postives = 89/157 (56.69%), Query Frame = 2
Query:   14 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERN-IRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIR--GFVEAYAEID 475
            +ML+++ PVG GFS+T+++   + + +   A D Y+ LI +F+ FP +K++DFY+ GESYAG YVP +A LIH  N +R  K   INL G  IG+   +  +   G  ++ +   ++ +K  K   K+C          C +HIR   + EA+  +D
Sbjct:  147 SMLYIDNPVGTGFSFTDDTHG-YAVNEDDVARDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLNPVREVK---INLNGIAIGDGYSDPESIIGGYAEFLYQIGLLDEKQKKYFQKQC--------HECIEHIRKQNWFEAFEILD 291          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.634e-18
Identity = 54/169 (31.95%), Postives = 89/169 (52.66%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECD---FGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVC 502
            K AN++FL+ PVG GFSY+    D  K GD      ++ FL  W  R P + S+  Y+ G+SY+G  VP L + I + N    +   INL+G+M+GN V     +    + YA+   +ISD++Y+ + + C+   +      + C      + +  A+I+I+ I +P C
Sbjct:  114 KMANIIFLDQPVGSGFSYSKTPID--KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPP-INLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDC 279          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.634e-18
Identity = 53/169 (31.36%), Postives = 88/169 (52.07%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ---SMIRSNCNDHIRGFVEAYAEIDIYSIYSPVC 502
            K AN++FL+ PVG GFSY+     + K+ D       Y FL  W  +   F S+ FY+ G+SY+G  VP L + I + N +      INL+G+++GN + +  ++    + YA   A+ISD+LYK + + C         + + C   I+ + +   +++ Y I  P C
Sbjct:  117 KMANIIFLDQPVGSGFSYSRTPL-VDKISDTGEVKRIYEFLQKWLSKHQQFFSNPFYVGGDSYSGMIVPPLVQEIGKGNYQ------INLQGYILGNPITDTESEQNYQIPYAHGMALISDELYKSMERICKGNYVKVDSLNTKCYKLIKDYQKCIHKLNKYHILLPDC 278          
The following BLAST results are available for this feature:
BLAST of CX287348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
CBP3_HORVU9.259e-2237.24Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CB... [more]
SCP53_ARATH3.518e-2163.77Putative serine carboxypeptidase-like 53 OS=Arabid... [more]
CBPX_ORYSJ6.002e-2137.69Serine carboxypeptidase-like OS=Oryza sativa subsp... [more]
SCP49_ARATH1.024e-2038.46Serine carboxypeptidase-like 49 OS=Arabidopsis tha... [more]
CBP3_WHEAT2.281e-2037.96Serine carboxypeptidase 3 OS=Triticum aestivum GN=... [more]
YUA6_CAEEL3.890e-2036.36Uncharacterized serine carboxypeptidase F13S12.6 O... [more]
CPVL_PONAB1.132e-1936.55Probable serine carboxypeptidase CPVL OS=Pongo abe... [more]
CPVL_HUMAN1.931e-1935.03Probable serine carboxypeptidase CPVL OS=Homo sapi... [more]
SCP8_ARATH1.634e-1831.95Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP13_ARATH1.634e-1831.36Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC01008E11SK Veg1 Citrus clementina cDNA clone C01008E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287348 ID=CX287348; Name=CX287348; organism=Citrus clementina; type=EST; length=568bp
GAACAAAGCTGCCAATATGCTGTTCTTGGAGGCTCCAGTGGGTGTAGGCT
TTTCATACACCAACAATTCTGAAGATTTACATAAACTTGGCGATCAAGTT
ACAGCAAATGATTCTTATGCATTCTTGATTGGATGGTTCAAAAGATTTCC
AAACTTCAAATCCCATGACTTTTACATTGCTGGAGAAAGCTATGCCGGTC
ATTATGTTCCTCAACTTGCTGAGCTCATTCACGAAAGAAACATAAGAGCT
GGCAAAGACTCATTTATAAATCTTAAGGGTTTCATGATAGGGAATGCCGT
GATCAATGATCCAACGGACACCAAAGGGCTAGTGGATTATGCATGGAGTC
ATGCAATTATATCAGACAAACTCTACAAAGATATAAGCAAGGAATGTGAT
TTTGGGCAAAGCATGATAAGAAGCAATTGCAATGATCATATCAGAGGCTT
TGTTGAAGCTTATGCTGAAATTGACATCTACAGCATTTACTCTCCAGTTT
GTTTGGATTCTCTTGATGGTAAAGCTCCTCCAAAACTGATGGTCGCCCCT
CATCTCCTGACTCAACAT
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