CX287348

Overview
NameCX287348
Unique NameCX287348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.788e-18
Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKEC 397
            NK A+++++E+P GVG+SY  +        D +T+ ++Y  +  +F  FP F+ H  +I GESY G YVP L      R +   KD  INLKG  +GN  +N+  +    V +A+ H +I +K++  + ++C
Sbjct:  102 NKMASVVYIESPAGVGYSYATDGNIT--TNDDLTSLENYEAVKQFFTEFPQFRHHQTFIMGESYGGVYVPTLT----ARIVDGQKDFPINLKGMALGNGYVNEKLNIDTSVRFAYGHGLIDEKIWNTLERDC 227          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.641e-18
Identity = 57/188 (30.32%), Postives = 95/188 (50.53%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQH 568
            K ++M+FL+ PVG GFSY+  ++  +K  D   A   + FL  W  +   F S+ FY+AG+SY+G  VP   + I + N        INL+G+++GN + +   D+   + +A   A+ISD+LY+ + K C    + +    N     F+E + +     I   + LD L     P   +  +LLT +
Sbjct:  124 KTSSMIFLDQPVGTGFSYSR-TQQFNKPSDSGEAKRIHEFLQKWLGKHQEFSSNPFYVAGDSYSGLVVPATVQEISKGNYECCNPP-INLQGYVLGNPLTDYAIDSNSRIPFAHGMALISDELYESLKKTCKGEYTNVHPR-NTQCLKFIEEFNKC-TNRILQQLILDPLCETETPDCYIYRYLLTTY 307          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCPL1_DICDI (Serine carboxypeptidase S10 family member 1 OS=Dictyostelium discoideum GN=DDB_G0291912 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.755e-18
Identity = 50/170 (29.41%), Postives = 92/170 (54.12%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAII-------SDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYA-EIDIYSI 487
            N  AN+L++++P+G GFSY  +S+       +++ N  Y+FL  +  ++P +     YI GESYAGHYVP  +  I+++N+     + INLKG  IGN +++       L  +A++H ++       ++ LY+   +  D G   + +   ++I   V+ YA   ++Y +
Sbjct:   95 NMVANVLYVDSPLGAGFSYVVDSDGYSTTETEISEN-LYSFLTQFLSKYPKYSKLPLYIFGESYAGHYVPSFSYYIYQKNLGL---ATINLKGLAIGNGMVDPYIQYGSLGPFAYAHGMLDINALKETEGLYESCQQAIDSGDYNMTTQICNNIMDIVQEYAGNFNVYDV 260          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.755e-18
Identity = 52/186 (27.96%), Postives = 99/186 (53.23%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCN-------DHIRGFVE-----AYAEIDIYSIYSPVCLDSLDGK 523
            N  AN+L++E+P GVGFSY+++   ++   D   A ++Y  L  +F+ FP +K +  ++ GESYAG Y+P LA L+ +       D  +NL+G  +GN + +   +   LV +A+ H ++ ++L+  +   C       ++ CN       + +   +E       + ++IY++Y+P C   + G+
Sbjct:  113 NLIANVLYIESPAGVGFSYSDDK--MYVTNDTEVAENNYEALKDFFRLFPEYKDNKLFLTGESYAGIYIPTLAVLVMQ-------DPSMNLQGLAVGNGLASYEQNDNSLVYFAYYHGLLGNRLWTSLQTHC-----CAQNKCNFYDNKDPECVNNLLEVSRIVGKSGLNIYNLYAP-CAGGVPGR 283          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.211e-18
Identity = 54/169 (31.95%), Postives = 88/169 (52.07%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMI---RSNCNDHIRGFVEAYAEIDIYSIYSPVC 502
            K ++M+FL+ PVG GFSY+  +E  +K  D   A   + FL  W  +   F S+ FY+ G+SY+G  VP   + I + N +  K   INL+G+M+GN + +   D    + YA   A+ISD+LY+ + + C      +    + C   +  F E  +++    I  P+C
Sbjct:  124 KNSSMIFLDQPVGTGFSYSR-TELFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGITVPATVQEISKGNYQCCKPP-INLQGYMLGNPITDSKIDGNSQIPYAHGMALISDELYESLKRICKGEYEHVDPYNTECLKLLEEFNECTSKLYRSHILYPLC 290          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.211e-18
Identity = 51/177 (28.81%), Postives = 92/177 (51.98%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIR------------GFVEAYAEIDIYSIYSP 496
            N  AN+L+LE+P GVGFSY+++    +   D   A  ++  L  +F  FP +K ++ ++ GESYAG Y+P LA L+ +       D  +NL+G  +GN + +   +   LV +A+ H ++ ++L+  +   C       ++ CN H                + A + ++IY++Y+P
Sbjct:  117 NLIANVLYLESPAGVGFSYSDDKS--YATNDTEVAQSNFEALKDFFCLFPEYKGNELFLTGESYAGIYIPTLAVLVMQ-------DPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHC-----CSQNQCNFHDNKEPECVANLQEVSHIVASSGLNIYNLYAP 279          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.111e-18
Identity = 57/188 (30.32%), Postives = 96/188 (51.06%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQH 568
            K ++++FL+ PVG GFSY+  ++  +K  D   A   + FL  W  +   F S+ FY+AG+SY+G  VP   + I + N        INL+G+++GN + +  T +   + +A   A+ISD+LY+ + K C    + +    N     FVE + +     I+  + LD L     P   +  +LLT +
Sbjct:  124 KTSSIIFLDQPVGTGFSYSR-TQQFNKPSDSGEAKRIHEFLQKWLGKHQVFSSNPFYVAGDSYSGLVVPATVQEISKGNYECCNPP-INLQGYVLGNPLTDYTTGSNSRIPFAHGMALISDELYESLKKTCKGEYTNVHPR-NTQCLKFVEEFNKC-TNRIFQQLILDPLCETETPDCYIYRYLLTTY 307          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.111e-18
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECD---FGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVC 502
            K AN++FL+ P+G GFSY+     +    D     + + FL  W  + P F S+ FY +G+SY+G  VP L + I + N    K   INL+G+++GN +     D    + ++   A+ISD+LY+ I ++C    F      + C   +  + +   E++ ++I SP C
Sbjct:  116 KTANIIFLDQPIGAGFSYSRIPL-IDTPSDTGEVKNIHEFLQKWLSKHPQFSSNPFYASGDSYSGMIVPALVQEISKGNYICCKPP-INLQGYILGNPITYFEVDQNYRIPFSHGMALISDELYESIRRDCKGNYFNVDPRNTKCLKLVEEYHKCTDELNEFNILSPDC 282          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.807e-17
Identity = 50/177 (28.25%), Postives = 92/177 (51.98%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYAE------------IDIYSIYSP 496
            N  AN+L+LE+P GVGFSY+++    +   D   A  ++  L  +F+ FP +K++  ++ GESYAG Y+P LA L+ +       D  +NL+G  +GN + +   +   LV +A+ H ++ ++L+  +   C       ++ CN +    +E                ++IY++Y+P
Sbjct:  118 NLIANVLYLESPAGVGFSYSDDK--FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQ-------DPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHC-----CSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAP 280          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.360e-17
Identity = 49/159 (30.82%), Postives = 81/159 (50.94%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECD---FGQSMIRSNCNDHIRGFVEAYAEI 472
            K AN+L+LEAP G G+SY           D    +    FL  WF + P F S+ FY+ G+SY+G  VP   + I   N   G    IN++G+++GN V +   +T   V +A    +ISD+L++ + + C    F      + C+++++ +    +EI
Sbjct:  118 KVANILYLEAPAGSGYSYAKTRRAFES-SDTKQMHQIDQFLRSWFVKHPEFISNPFYVGGDSYSGKIVPGAVQQISLGN-EKGLTPLINIQGYVLGNPVTDKNIETNYRVPFAHGMGLISDELFESLERSCGGKFFNVDPSNARCSNNLQAYDHCMSEI 274          
The following BLAST results are available for this feature:
BLAST of CX287348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
YUW5_CAEEL2.788e-1834.09Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
SCP2_ARATH3.641e-1830.32Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]
SCPL1_DICDI4.755e-1829.41Serine carboxypeptidase S10 family member 1 OS=Dic... [more]
PPGB_MOUSE4.755e-1827.96Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
SCP6_ARATH6.211e-1831.95Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]
PPGB_BOVIN6.211e-1828.81Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
SCP1_ARATH8.111e-1830.32Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
SCP12_ARATH8.111e-1830.77Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
PPGB_HUMAN1.807e-1728.25Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
SCP19_ARATH2.360e-1730.82Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01008E11SK Veg1 Citrus clementina cDNA clone C01008E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287348 ID=CX287348; Name=CX287348; organism=Citrus clementina; type=EST; length=568bp
GAACAAAGCTGCCAATATGCTGTTCTTGGAGGCTCCAGTGGGTGTAGGCT
TTTCATACACCAACAATTCTGAAGATTTACATAAACTTGGCGATCAAGTT
ACAGCAAATGATTCTTATGCATTCTTGATTGGATGGTTCAAAAGATTTCC
AAACTTCAAATCCCATGACTTTTACATTGCTGGAGAAAGCTATGCCGGTC
ATTATGTTCCTCAACTTGCTGAGCTCATTCACGAAAGAAACATAAGAGCT
GGCAAAGACTCATTTATAAATCTTAAGGGTTTCATGATAGGGAATGCCGT
GATCAATGATCCAACGGACACCAAAGGGCTAGTGGATTATGCATGGAGTC
ATGCAATTATATCAGACAAACTCTACAAAGATATAAGCAAGGAATGTGAT
TTTGGGCAAAGCATGATAAGAAGCAATTGCAATGATCATATCAGAGGCTT
TGTTGAAGCTTATGCTGAAATTGACATCTACAGCATTTACTCTCCAGTTT
GTTTGGATTCTCTTGATGGTAAAGCTCCTCCAAAACTGATGGTCGCCCCT
CATCTCCTGACTCAACAT
back to top