CX287348

Overview
NameCX287348
Unique NameCX287348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP14_ARATH (Serine carboxypeptidase-like 14 OS=Arabidopsis thaliana GN=SCPL14 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.451e-16
Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMI---RSNCNDHIRGFVEAYAEIDIYSIYSPVC 502
            K AN+++L+ PVG GFSY+ N     +  D  +A     F+  W  + P++ S+ FY+ G SY+G  +P + + I   N    K   INL+G++IGN V     D    + +A   A+ISD+L++ + + C    S++    + C   I+ + +  + I    I  P C
Sbjct:  118 KVANIIYLDQPVGAGFSYSRNPF-ADRPSDTGSAKLVNEFVRKWLAKHPDYFSNPFYVTGNSYSGKVIPAIVQEISNGNYICCKPQ-INLQGYVIGNPVAYYDHDKDSRIPFAHGVALISDELFESLKRSCGGSYSIVDPLNTECLKLIKDYHKCVSGIYQELILKPKC 284          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.813e-16
Identity = 52/171 (30.41%), Postives = 82/171 (47.95%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMI---RSNCNDHIRGFVEAYAEIDIYSIYSPVCL 505
            K A++L+L+ PVG GFSY+ N   D+    D   A     FL  W  + P F S+  Y+AG SY+G  +P + + I   N    K   INL+GF++GN   +   D    + +A   A+ISD+ Y+ + + C      +    + C   +  F +  + I    I  P C+
Sbjct:  121 KVASILYLDQPVGTGFSYSRNPLADIPS--DTGVAKPVNEFLHKWLDKHPEFLSNPLYVAGNSYSGIVIPTIVQEISNGNHLDSKPQ-INLQGFVLGNPATDTDIDLNSRIPFAHGKALISDEHYESLKRSCQGNYISVNPRNTKCLKLLEDFKKCVSGISEEYILKPDCM 288          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.295e-15
Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKEC 397
            K AN++FL+ PVG GFSY+     + +  D       + FL  W  + P F S+ FY+ G+SY+G  VP L   I + N        INL+G+++GN + +   +    + YA   ++ISD+LY+ + + C
Sbjct:  116 KTANIIFLDQPVGSGFSYSKTP--IERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP-INLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRIC 243          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP10_ARATH (Serine carboxypeptidase-like 10 OS=Arabidopsis thaliana GN=SCPL10 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.691e-15
Identity = 43/131 (32.82%), Postives = 72/131 (54.96%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKEC 397
            K AN+++L+ PVG GFSY+     + K  D       + FL  W  + P F S+ FY+ G+SY+G  VP L + I + N    K   INL+G+++GN +     +    + ++   ++ISD+LY+ + + C
Sbjct:  116 KMANIIYLDQPVGSGFSYSRTP--IGKSSDTSEVKRIHEFLQKWLSKHPQFFSNPFYVTGDSYSGMIVPALVQEISKGNYICCK-HLINLQGYVLGNPITYAEHEKNYRIPFSHGMSLISDELYESLKRNC 243          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: YXD2_CAEEL (Uncharacterized serine carboxypeptidase C08H9.1 OS=Caenorhabditis elegans GN=C08H9.1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15
Identity = 51/156 (32.69%), Postives = 83/156 (53.21%), Query Frame = 2
Query:   11 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKEC-----------DFGQSMIRSNCNDHI 442
            AN+LFLE+P+GVGFSY     +  K+ D   A  ++  +I +F+R   ++ +HDF+IA ESY G Y P L+ L+ + +I   +    N KG +IGN  +N    T  ++ ++  H   S   + +I ++C           DF Q M  +N  D++
Sbjct:  112 ANILFLESPIGVGFSYDTEQSNFTKVNDDSIAEQNFNSVIDFFQRKHSSYVNHDFFIAAESYGGVYGPMLSALVVD-SISKREFPNENFKGLIIGNGFMNVKLSTNTMILWSAYHDRTSPDEWDEIKEKCATSGAHDVDYYDFMQFMKTTNKMDYL 266          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15
Identity = 45/131 (34.35%), Postives = 74/131 (56.49%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKEC 397
            K ++M+FL+ PVG GFSY+  ++  +K  D   A   + FL  W  +   F S+ FY+ G+SY+G  VP   + I + N +      INL+G+++GN + +   D    V +A   A+ISD+LY+ + + C
Sbjct:  124 KTSSMIFLDQPVGTGFSYSR-TQLFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGLVVPATVQEISKGNCQCCNRP-INLQGYVLGNPLTDCVYDCNYRVPFAHKMALISDELYESLKRTC 252          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15
Identity = 55/190 (28.95%), Postives = 92/190 (48.42%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNN--SEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQH 568
            K AN+++L+ PVG GFSY+ N  ++     G     N+   F+  W  + P + S+ FY+ G SY+G  +P + + I   N    K   INL+G++IGN V     D    + +A   A+ISD+L++ +   C    S++    N      +E Y +  +  IY  + L S      P      +LL+++
Sbjct:  119 KVANIIYLDQPVGTGFSYSRNPFADIPSDTGSVKRVNE---FVRKWLAKHPEYFSNPFYVTGNSYSGKVIPAIVQEISNGNYICCKPQ-INLQGYVIGNPVAYYDHDKDFRIPFAHGVALISDELFESLKASCGGSYSVV-DPLNTECLKLIEDYDKC-VSGIYEELILKSKCEHTSPDCYTYRYLLSEY 302          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.096e-14
Identity = 45/132 (34.09%), Postives = 72/132 (54.55%), Query Frame = 2
Query:    5 KAANMLFLEAPVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKEC 397
            K AN+++L+ PVG GFSY+ N   D+    D  +A     FL  W  + P + S+ FY  G SY+G  VP + + I   N   GK   I L+G+++G+ V +   D    + +A   A+IS++LY+ + + C
Sbjct:  118 KVANIIYLDQPVGTGFSYSRNPLADIPS--DTGSAKRVDEFLRKWLTKHPEYFSNPFYAGGNSYSGKMVPVIVQEISNGNCIYGKPQ-IRLQGYVLGSPVTDYDLDRNSRIQFAHGMALISNELYESMKRTC 246          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCPL2_DICDI (Serine carboxypeptidase S10 family member 2 OS=Dictyostelium discoideum GN=DDB_G0280105 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.442e-14
Identity = 43/129 (33.33%), Postives = 72/129 (55.81%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSF-INLKGFMIGNAVINDPTDTKGLVDYA-WSHAIISDKLYKD 382
            + +ANML+++ P G G S+ ++++ L     ++  N  Y F+  +F+ F N+ +  F+I+GESYAGHY+P +A  I   N    KDS  INL+G  IGN   +  T      ++  ++  II  + Y +
Sbjct:  164 HNSANMLYIDQPFGTGLSFVSDNDGLVTNDLEINQN-FYQFIQEFFQIFSNYSTLPFFISGESYAGHYIPHMASYILNMNENLSKDSIKINLQGVAIGNGYTHPTTQINSYREFGYYATGIIGQRQYNN 291          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: CBPY_PICPG (Carboxypeptidase Y OS=Pichia pastoris (strain GS115) GN=PRC1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.190e-14
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 313
            N  A++++L+ PV VGFSY+++S         V   D YAFL  +F+ FP ++++DF+IAGESYAGHY+P  A+      I + K+   NL   +IGN  + DP
Sbjct:  191 NGNASIIYLDQPVNVGFSYSSSSVS----NTVVAGEDVYAFLQLFFQHFPEYQTNDFHIAGESYAGHYIPVFAD-----EILSQKNRNFNLTSVLIGNG-LTDP 284          
The following BLAST results are available for this feature:
BLAST of CX287348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
SCP14_ARATH4.451e-1630.18Serine carboxypeptidase-like 14 OS=Arabidopsis tha... [more]
SCP17_ARATH5.813e-1630.41Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SCP9_ARATH1.295e-1533.59Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]
SCP10_ARATH1.691e-1532.82Serine carboxypeptidase-like 10 OS=Arabidopsis tha... [more]
YXD2_CAEEL2.209e-1532.69Uncharacterized serine carboxypeptidase C08H9.1 OS... [more]
SCP4_ARATH2.209e-1534.35Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
SCP15_ARATH2.209e-1528.95Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]
SCP16_ARATH1.096e-1434.09Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
SCPL2_DICDI2.442e-1433.33Serine carboxypeptidase S10 family member 2 OS=Dic... [more]
CBPY_PICPG3.190e-1441.35Carboxypeptidase Y OS=Pichia pastoris (strain GS11... [more]

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Properties
Property NameValue
Genbank descriptionC01008E11SK Veg1 Citrus clementina cDNA clone C01008E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287348 ID=CX287348; Name=CX287348; organism=Citrus clementina; type=EST; length=568bp
GAACAAAGCTGCCAATATGCTGTTCTTGGAGGCTCCAGTGGGTGTAGGCT
TTTCATACACCAACAATTCTGAAGATTTACATAAACTTGGCGATCAAGTT
ACAGCAAATGATTCTTATGCATTCTTGATTGGATGGTTCAAAAGATTTCC
AAACTTCAAATCCCATGACTTTTACATTGCTGGAGAAAGCTATGCCGGTC
ATTATGTTCCTCAACTTGCTGAGCTCATTCACGAAAGAAACATAAGAGCT
GGCAAAGACTCATTTATAAATCTTAAGGGTTTCATGATAGGGAATGCCGT
GATCAATGATCCAACGGACACCAAAGGGCTAGTGGATTATGCATGGAGTC
ATGCAATTATATCAGACAAACTCTACAAAGATATAAGCAAGGAATGTGAT
TTTGGGCAAAGCATGATAAGAAGCAATTGCAATGATCATATCAGAGGCTT
TGTTGAAGCTTATGCTGAAATTGACATCTACAGCATTTACTCTCCAGTTT
GTTTGGATTCTCTTGATGGTAAAGCTCCTCCAAAACTGATGGTCGCCCCT
CATCTCCTGACTCAACAT
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