CX287363

Overview
NameCX287363
Unique NameCX287363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VNIYP+ S  GN       YA F     +V  G+  QY N+FDA  D++ +A++  G G + ++V E GWP+ G   A   NA  +   L+    A +G+P +PG IE Y+F + DE+ K+ +    E+H+G+
Sbjct:  174 VNIYPYFSYSGNPGQISLPYALFTAPNAVVQDGSR-QYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAGAFGATQDNAATYLRNLIQH--AKEGSPRKPGPIETYIFAMFDENNKNPE---LEKHFGL 300          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.318e-17
Identity = 53/137 (38.69%), Postives = 72/137 (52.55%), Query Frame = 2
Query:   23 VNIYPFLSLYGNDDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTD---GDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPG-YFERHWGI 418
            VN YP+ S         NYA F   + I D  T + YT++ DA  D + +A+K +G+GD+ + VGE GWPT    G        A  F  G++   ++ KGTPL P    E YLF L DE+ K   PG   ERH+G+
Sbjct:  203 VNPYPYFSYRPET---LNYALFRPNSGIYDPATKLNYTSMLDAQMDAIYTAMKKLGYGDVDIAVGEAGWPTQAEPGQIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQK---PGPIAERHFGL 333          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.318e-17
Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VNIYP+ S  GN       YA F     +V  G+  QY N+FDA  D++ +A++  G G + ++V E GWP+ G   A   NA  +   L+    A +G+P +PG IE Y+F + DE+ K+ +    E+H+G+
Sbjct:  165 VNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSR-QYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAGAFGATQDNAATYLRNLIQH--AKEGSPRKPGPIETYIFAMFDENNKNPE---LEKHFGL 291          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.071e-17
Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VNIYP+ S  GN       YA F     +V  G+  QY N+FDA  D++ +A+   G G + ++V E GWP+ G   A + NA  +   L+    A +G+P +PG IE Y+F + DE+ K+ +    E+H+G+
Sbjct:  200 VNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSR-QYRNLFDAMLDSVYAAMDRTGGGSVGIVVSESGWPSAGAFGATHENAQTYLRNLIQH--AKEGSPRKPGPIETYIFAMFDENNKNPE---LEKHFGM 326          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.185e-16
Identity = 47/134 (35.07%), Postives = 73/134 (54.48%), Query Frame = 2
Query:   23 VNIYPFLSLYGN-DDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGY-IEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VN+YP+ +  GN  D   +YA F   + +V  G    Y N+FDA  D + +AL+  G G + +++ E GWP+         NA  F + L+  +   +GTP RPG  IE Y+F + DE+ K+ +    E+HWG+
Sbjct:  209 VNLYPYFAYSGNTQDIRLDYALFTAPSVVVQDGN-FGYRNLFDAMLDGVYAALEKAGGGSLKVVISETGWPSAAGTATTIDNARTFISNLIQHV--KEGTPRRPGRPIETYIFAMFDENRKTPE---LEKHWGL 336          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16
Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VNIYP+ S  GN  D    YA F     +V  G+ + Y N+FDA  D + +AL   G G + ++V E GWP+ G   A   NA  +Y  L+  +   +G+P RP   IE YLF + DE+ K+ +    E+H+G+
Sbjct:  206 VNIYPYFSYAGNPRDISLPYALFTAPNVVVQDGS-LGYRNLFDAMSDAVYAALSRAGGGSIEIVVSESGWPSAGAFAATTNNAATYYKNLIQHV--KRGSPRRPNKVIETYLFAMFDENNKNPE---LEKHFGL 333          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16
Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = 2
Query:   23 VNIYPFLSLYGNDD-FPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDG---DKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPGY-FERHWGI 418
            +++YP+ +   + +  P  YA F+  + +VD  TG+ Y+N+FDA  D +  AL A+    + ++V E GWP+ G   +  A   NA  +   L+  +  + GTP +PG  I+VYLF L +E+ K   PG   ER+WG+
Sbjct:  198 IDLYPYYAYRDSTEKVPLEYALFESSSQVVDPATGLLYSNMFDAQLDAIYFALTAMSFKTVKVMVTESGWPSKGSPKETAATPENALAYNTNLIRHVIGDPGTPAKPGEEIDVYLFSLFNENRK---PGIESERNWGM 332          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.447e-16
Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 2
Query:   23 VNIYPFLSLYGNDDFPFN----YAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKN----ANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKS-IDPGYFERHWGI 418
            +++YP+   Y   D P N    Y  F+  + ++D  TG+ Y N+FDA  D L  AL A+    + ++V E GWPT G       A++ NA  + + ++  +  N+GTP +PG  + VY+F L +E+ K+ +D    ER+WG+
Sbjct:  198 IDLYPY---YAYRDSPNNVSLDYVLFESSSEVIDPNTGLLYKNMFDAQVDALYYALTALNFRTIKIMVTETGWPTKGSPKEKAAASSDNAETYNSNIIRHVVTNQGTPAKPGEAMNVYIFSLFNENRKAGLDS---ERNWGL 333          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=GSVIVT00022223001 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.502e-16
Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = 2
Query:   26 NIYPFLSLYGN-DDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            NIYP+ S  G+  +   +YA F     +V  G+  QY N+FDA  D L +AL+  G  ++ ++V E GWP++G   A   NA  +Y  L+  +    GTP + G IE YLF + DE+ K+      E+H+G+
Sbjct:  146 NIYPYFSYTGDTQNIRLDYALFTASGVVVQDGS-YQYQNLFDALLDALYAALEKAGGSNLKIVVSESGWPSEGGTAATVDNARTYYKNLINHVKG--GTPRKSGAIETYLFAMFDENQKT--GLETEKHFGL 272          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.880e-16
Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VN+YP+ S  GN  D    YA F     +V  G    Y N+FDA  D++ +AL   G G + ++V E GWP+DG    +  NA  + + L+  +   KGTP RP   E YLF + DE+ KS +    E+H+G+
Sbjct:  207 VNVYPYFSHIGNPRDISLPYALFTSPGVMVQDGPN-GYQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGSATSYDNARIYLDNLIRHV--GKGTPRRPWATEAYLFAMFDENQKSPE---LEKHFGV 333          
The following BLAST results are available for this feature:
BLAST of CX287363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E131_SOLTU4.072e-1736.09Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
E13B_WHEAT5.318e-1738.69Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E133_SOLTU5.318e-1736.09Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]
E13B_SOLLC9.071e-1736.09Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E13B_PRUPE1.185e-1635.07Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
GUB_NICPL1.547e-1637.31Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E1312_ARATH2.021e-1634.78Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E1313_ARATH3.447e-1633.80Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E13B_VITVI4.502e-1636.36Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera... [more]
E13B_PEA5.880e-1637.59Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]

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Properties
Property NameValue
Genbank descriptionC01008G04SK Veg1 Citrus clementina cDNA clone C01008G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287363 ID=CX287363; Name=CX287363; organism=Citrus clementina; type=EST; length=418bp
CTCGTGCCGAATTCGGCACGAGGTAAACATCTATCCTTTCCTAAGTCTTT
ATGGAAACGATGACTTCCCTTTTAACTATGCTTTCTTTGATGGGGGTACT
CCCATTGTTGATAGCGGAACTGGGATTCAATACACAAATGTTTTTGACGC
CAATTTTGACACTTTGGTTTCGGCTCTGAAAGCTGTTGGCCATGGAGACA
TGCCTATGATTGTAGGAGAGGTGGGTTGGCCAACTGATGGGGACAAGAAT
GCGAATAATGGTAATGCTTATAGATTCTACAATGGACTTTTACCAAAACT
TGCAGCCAATAAAGGCACTCCACTGCGGCCTGGATATATTGAAGTGTACT
TGTTTGGGTTAGTTGATGAGGATGCAAAGAGTATTGATCCTGGATATTTT
GAGCGTCACTGGGGAATC
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