CX287363

Overview
NameCX287363
Unique NameCX287363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_BRACM (Glucan endo-1,3-beta-glucosidase OS=Brassica campestris GN=BGL PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.880e-16
Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 2
Query:   23 VNIYPFLSLYGNDDFPFNYAFF--DGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANK-GTPLRPGYIEVYLFGLVDEDAKSIDPG-YFERHWGI 418
            VNIY +   Y N D    +A    +      D    ++Y N FDAN D++ +AL+  G G + ++V E GWPT G   A+  NA  + N L  +L  NK G+P R   IE Y+F + DE  +   P   +E++WG+
Sbjct:  195 VNIYTYFG-YMNRDVSLQFALLQPNSNNEFTDPNNQLRYLNFFDANLDSVYAALEKSGGGSLDVVVSESGWPTQGGPGASVPNAEAYVNNL--RLHVNKNGSPKRQEAIETYIFAMFDEAPRQTSPNDEYEKYWGM 327          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.880e-16
Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKN---ANNGNAYRFYNGLLPKLAANKGTPLRPGY-IEVYLFGLVDEDAKSIDPG-YFERHWGI 418
            +N YPF +   +  + P  Y  F     +VD  T + Y N+  A  D L SA+K +GH D+ + + E GWP+ GD+N   A+  NA  +   LL  +   KGTP +    I+VY+F L +E+ K   PG   ER++G+
Sbjct:  201 INAYPFFAYKDSPKEVPLEYVLFQPNQGMVDPNTNLHYDNMLFAQVDALYSAIKTLGHTDIEVRISETGWPSKGDENEIGASPENAALYNGNLLKLIQQRKGTPAKQSVPIDVYVFALFNENLK---PGPVSERNYGL 335          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13C_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41A PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.679e-16
Identity = 49/134 (36.57%), Postives = 77/134 (57.46%), Query Frame = 2
Query:   26 NIYPFLS-LYGNDDFPFNYAFFDG-GTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            NIYP+   +Y   D P +YA F+  GT    + TG  Y N+FDA  D++  A++  G  ++ +IV E GWP++G+  A   NA  +Y  L+  +    GTP +PG  +E YLF + DE+ K+ +    E+H+G+
Sbjct:  208 NIYPYFGHIYNTVDVPLSYALFNQQGT----NSTG--YQNLFDALLDSIYFAVEKAGGPNVEIIVSESGWPSEGNSAATIENAQTYYRNLVNHVKGGAGTPKKPGRIVETYLFAMFDENEKNGE--VTEKHFGL 333          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VNIYP+ S  GN       Y+ F     +V  G+  QY N+FDA  D++ +AL+  G   + ++V E GWP+ G   A   NA  +   L+    A +G+P +PG IE Y+F + DE+ K+ +    E+H+G+
Sbjct:  208 VNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSR-QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDNAATYLRNLIQH--AKEGSPRKPGPIETYIFAMFDENNKNPE---LEKHFGL 334          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13E_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VNIYP+ S  GN       Y+ F     +V  G+  QY N+FDA  D++ +AL+  G   + ++V E GWP+ G   A   NA  +   L+    A +G+P +PG IE Y+F + DE+ K+ +    E+H+G+
Sbjct:  208 VNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSR-QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDNAATYLRNLIQH--AKEGSPRKPGPIETYIFAMFDENNKNPE---LEKHFGL 334          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VNIYP+ S  GN       Y+ F     +V  G+  QY N+FDA  D++ +AL+  G   + ++V E GWP+ G   A   NA  +   L+    A +G+P +PG IE Y+F + DE+ K+ +    E+H+G+
Sbjct:  209 VNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSR-QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDNAATYLRNLIQH--AKEGSPRKPGPIETYIFAMFDENNKNPE---LEKHFGL 335          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13D_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41B PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 2
Query:   26 NIYPFLS-LYGNDDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            NIYP+   +Y   D P +YA F+       + TG  Y N+FDA  D++  A++  G  ++ +IV E GWP++G+  A   NA  +Y  L+  +    GTP +PG  IE YLF + DE+ K  +    E+H+G+
Sbjct:  208 NIYPYFGHIYNTVDVPLSYALFNQQET---NSTG--YQNLFDALLDSIYFAVEKAGGPNVEIIVSESGWPSEGNSAATIENAQTYYRNLVNHVKGGAGTPKKPGRIIETYLFAMFDENEKQGE--ITEKHFGL 333          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_HORVU (Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 45/132 (34.09%), Postives = 72/132 (54.55%), Query Frame = 2
Query:   26 NIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            N+YP+ +   N      NYA F  GT + D   G+ YT++FDA  D + +AL+  G   + ++V E GWP+ G   A+ GNA  +  GL+  +    GTP +   +E Y+F + +E+ K+ D    ER +G+
Sbjct:  194 NVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGGFAASAGNARTYNQGLINHVGG--GTPKKREALETYIFAMFNENQKTGDA--TERSFGL 321          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 2
Query:   26 NIYPFLSLYGNDDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            NIYP+   + +D+ P  YA F     + D+G    Y N+FDA  D++  A + +G  ++ +IV E GWP++G  +A   NA  +Y  L+  +    GTP +PG  IE YLF + DE+ K   P   E+H+G+
Sbjct:  199 NIYPYFG-HADDNVPLPYALFKQ-QGLNDAG----YQNLFDALVDSMYFATEKLGGQNIEIIVSESGWPSEGHPSATLENAMTYYTNLINHVKGGAGTPKKPGRTIETYLFAMFDENRKDGKPS--EQHFGL 322          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 47/140 (33.57%), Postives = 76/140 (54.29%), Query Frame = 2
Query:   23 VNIYPFLS-LYGNDDFPFNYAFFDGGTP---IVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKN---ANNGNAYRFYNGLLPKLAANKGTPLRPGY-IEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VN+YP++  +  N   P +YA F    P    VD+ T ++Y+N FDA  D    A+  +   ++P++V E GWP+ G+ N   A   NA  + + L+  +    GTP RPG  +  Y++ L +ED K+   G  E++WG+
Sbjct:  203 VNVYPYIDYMQSNGVIPLDYALFKPIPPNKEAVDANTLVRYSNAFDAMVDATYFAMAFLNFTNIPVLVTESGWPSKGETNEPDATLDNANTYNSNLIRHVLNKTGTPKRPGIAVSTYIYELYNEDTKA---GLSEKNWGL 339          
The following BLAST results are available for this feature:
BLAST of CX287363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E13B_BRACM5.880e-1635.29Glucan endo-1,3-beta-glucosidase OS=Brassica campe... [more]
E1314_ARATH5.880e-1635.51Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E13C_TOBAC7.679e-1636.57Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13F_TOBAC1.003e-1535.34Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13E_TOBAC1.003e-1535.34Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_TOBAC1.003e-1535.34Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13D_TOBAC1.310e-1536.09Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13B_HORVU2.234e-1534.09Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vu... [more]
E13A_SOLLC2.234e-1536.36Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E132_ARATH2.234e-1533.57Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC01008G04SK Veg1 Citrus clementina cDNA clone C01008G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287363 ID=CX287363; Name=CX287363; organism=Citrus clementina; type=EST; length=418bp
CTCGTGCCGAATTCGGCACGAGGTAAACATCTATCCTTTCCTAAGTCTTT
ATGGAAACGATGACTTCCCTTTTAACTATGCTTTCTTTGATGGGGGTACT
CCCATTGTTGATAGCGGAACTGGGATTCAATACACAAATGTTTTTGACGC
CAATTTTGACACTTTGGTTTCGGCTCTGAAAGCTGTTGGCCATGGAGACA
TGCCTATGATTGTAGGAGAGGTGGGTTGGCCAACTGATGGGGACAAGAAT
GCGAATAATGGTAATGCTTATAGATTCTACAATGGACTTTTACCAAAACT
TGCAGCCAATAAAGGCACTCCACTGCGGCCTGGATATATTGAAGTGTACT
TGTTTGGGTTAGTTGATGAGGATGCAAAGAGTATTGATCCTGGATATTTT
GAGCGTCACTGGGGAATC
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