CX287363

Overview
NameCX287363
Unique NameCX287363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 2
Query:   26 NIYPFLS-LYGNDDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            N+YP+   ++   D P +YA F              Y N+FDA  D++  A++  G  ++ +IV E GWP++G+  A   NA  +Y  L+  + +  GTP +PG  IE YLF + DE+ K  D    E+H+G+
Sbjct:  136 NVYPYFGHIFNTADVPLSYALFTQ-----QEANPAGYQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWPSEGNSAATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGD--ITEKHFGL 261          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 2
Query:   26 NIYPFLS-LYGNDDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            N+YP+   ++   D P +YA F              Y N+FDA  D++  A++  G  ++ +IV E GWP++G+  A   NA  +Y  L+  + +  GTP +PG  IE YLF + DE+ K  D    E+H+G+
Sbjct:  204 NVYPYFGHIFNTADVPLSYALFTQ-----QEANPAGYQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWPSEGNSAATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGD--ITEKHFGL 329          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15
Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGY-IEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VN+Y + +   N  D   +YA F   + +V  G+ + Y N+FDA+ D + +AL+  G G + ++V E GWP+ G    +  NA R YN  L +    +GTP RPG  +E Y+F + DE+ K  +   FE+ WG+
Sbjct:  205 VNVYSYFAYTANPKDISLDYALFRSPSVVVQDGS-LGYRNLFDASVDAVYAALEKAGGGSLNIVVSESGWPSSGGTATSLDNA-RTYNTNLVR-NVKQGTPKRPGAPLETYVFAMFDENQKQPE---FEKFWGL 332          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13J_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O (Fragment) OS=Nicotiana tabacum GN=PR0 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.977e-15
Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 2
Query:   26 NIYPFLS-LYGNDDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            N+YP+   +Y   D P +YA F              Y N+FDA  D++  A++  G  ++ +IV E GWP++G+  A   NA  +Y  L+  +    GTP +PG  IE YLF + DE+ K  +    E+H+G+
Sbjct:   21 NVYPYFGHIYNTADVPLSYALFTQ-----QEANPAGYQNLFDALLDSMYFAVEKAGGPNVEIIVSESGWPSEGNSAATIENAQTYYRNLIDHVKRGAGTPKKPGKTIETYLFAMFDENDKKGE--ITEKHFGL 146          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_SOYBN (Glucan endo-1,3-beta-glucosidase (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 2
Query:   26 NIYPFLSLYGNDDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFG-LVDEDAKSI 385
            N+YP+ +   +   P  YA F            + Y N+FDA  D++ +AL+ VG  ++ ++V E GWP++G   A+  NA  +Y  L+   ++  GTP RPG  IE YLFG  + E+ K +
Sbjct:  124 NVYPYFAYANDQSIPLAYALFTQ-----QGNNDVGYQNLFDAMLDSIYAALENVGASNLQIVVSESGWPSEGGAGASIDNAGTYYANLIRHASSGDGTPKRPGESIETYLFGRCLSENQKQV 240          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.490e-15
Identity = 51/135 (37.78%), Postives = 72/135 (53.33%), Query Frame = 2
Query:   23 VNIYPFLSLYGNDDFPFNYAFFDGGTPIV-DSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANN-GNAYRFYNGLLPKLAANKGTPLRP-GYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VN+YP+ ++  N D    YA F     +V D+G G  Y N+FDA  D   SAL+      + ++V E GWP+ G     +  NA  + N L+  +    G+P RP G IE Y+F L DED K  DP   E+H+G+
Sbjct:  198 VNLYPYFAIANNADIKLEYALFTSSEVVVNDNGRG--YRNLFDAILDATYSALEKASGSSLEIVVSESGWPSAGAGQLTSIDNARTYNNNLISHVKG--GSPKRPSGPIETYVFALFDEDQK--DP-EIEKHFGL 325          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.490e-15
Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 2
Query:   23 VNIYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            VNIYP+ S  GN       Y+ F     +V  G+  QY N+FDA  D++ +AL+  G   + ++V E GWP+ G   A   NA  +   L+    A +G+P +P  IE Y+F + DE+ K+ +    E+H+G+
Sbjct:  208 VNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSR-QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDNAATYLKNLIQH--AKEGSPRKPRPIETYIFAMFDENNKNPE---LEKHFGL 334          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14
Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 2
Query:   26 NIYP-FLSLYGNDDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            N+YP F+ +    D P +YA F   T    +  G  Y N+FDA  D++  A++  G  ++ +IV E GWP++G+  A   NA  +Y  L+  +    GTP +PG  IE YLF + DE+ K  +    E+H+G+
Sbjct:  204 NVYPYFVHISNTADVPLSYALF---TQRGKNSAG--YQNLFDAILDSMYFAVEKAGGPNVEIIVSESGWPSEGNSAATIENAQTYYRNLIDHVKRGAGTPKKPGKSIETYLFAMFDENVKKGE--ITEKHFGL 329          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 2
Query:   26 NIYPFLSLYGND-DFPFNYAFFDGGTPIV-DSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            N+YP+ +   N  D   NYA F  GT  V D  TG+    +FDA  D +V+AL+  G   + ++V E GWP+     A   NA  +  GL+  +    GTP RPG +E Y+F + +E+ K+ +    E+H+G+
Sbjct:  168 NVYPYFAYKDNPRDIQLNYATFRPGTTTVRDPNTGLTSQCLFDAMVDAVVAALERSGAPGVRVVVSESGWPSASGFAATADNARAYNQGLIDHVGG--GTPKRPGALETYIFAMFNENFKTGE--LTEKHFGL 296          
BLAST of CX287363 vs. ExPASy Swiss-Prot
Match: GUB2_HORVU (Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.214e-14
Identity = 50/133 (37.59%), Postives = 69/133 (51.88%), Query Frame = 2
Query:   26 NIYPFLS-LYGNDDFPFNYAFFDG-GTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDPGYFERHWGI 418
            NIYP+L+  Y        YA F+  GT + D   G  Y N+FD   D   +A+   G   + ++V E GWP+ G   A   NA RFYN  L      +GTP  PG IE Y+F + +E+ K  D G  E++WG+
Sbjct:  174 NIYPYLAWAYNPSAMDMGYALFNASGTVVRDGAYG--YQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGGGTAATPANA-RFYNQHLIN-HVGRGTPRHPGAIETYIFAMFNENQK--DSG-VEQNWGL 299          
The following BLAST results are available for this feature:
BLAST of CX287363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E13I_TOBAC3.811e-1533.83Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13G_TOBAC3.811e-1533.83Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13A_SOYBN3.811e-1535.82Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13J_TOBAC4.977e-1533.83Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13B_SOYBN6.501e-1534.43Glucan endo-1,3-beta-glucosidase (Fragment) OS=Gly... [more]
E13H_TOBAC8.490e-1537.78Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13B_NICPL8.490e-1534.59Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13L_TOBAC1.109e-1435.34Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13A_HORVU2.470e-1435.34Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vul... [more]
GUB2_HORVU4.214e-1437.59Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC01008G04SK Veg1 Citrus clementina cDNA clone C01008G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287363 ID=CX287363; Name=CX287363; organism=Citrus clementina; type=EST; length=418bp
CTCGTGCCGAATTCGGCACGAGGTAAACATCTATCCTTTCCTAAGTCTTT
ATGGAAACGATGACTTCCCTTTTAACTATGCTTTCTTTGATGGGGGTACT
CCCATTGTTGATAGCGGAACTGGGATTCAATACACAAATGTTTTTGACGC
CAATTTTGACACTTTGGTTTCGGCTCTGAAAGCTGTTGGCCATGGAGACA
TGCCTATGATTGTAGGAGAGGTGGGTTGGCCAACTGATGGGGACAAGAAT
GCGAATAATGGTAATGCTTATAGATTCTACAATGGACTTTTACCAAAACT
TGCAGCCAATAAAGGCACTCCACTGCGGCCTGGATATATTGAAGTGTACT
TGTTTGGGTTAGTTGATGAGGATGCAAAGAGTATTGATCCTGGATATTTT
GAGCGTCACTGGGGAATC
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