CX287432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_AETGR (ATP synthase subunit alpha, chloroplastic OS=Aethionema grandiflora GN=atpA PE=3 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 2.180e-79 Identity = 150/153 (98.04%), Postives = 152/153 (99.35%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRE+HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL SQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_AETCO (ATP synthase subunit alpha, chloroplastic OS=Aethionema cordifolium GN=atpA PE=3 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 2.180e-79 Identity = 150/153 (98.04%), Postives = 152/153 (99.35%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRE+HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL SQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_GOSHI (ATP synthase subunit alpha, chloroplastic OS=Gossypium hirsutum GN=atpA PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 3.719e-79 Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK SQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_GOSBA (ATP synthase subunit alpha, chloroplastic OS=Gossypium barbadense GN=atpA PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 3.719e-79 Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK SQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_OLIPU (ATP synthase subunit alpha, chloroplastic OS=Olimarabidopsis pumila GN=atpA PE=3 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 4.857e-79 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRE+HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL SQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_HELAN (ATP synthase subunit alpha, chloroplastic OS=Helianthus annuus GN=atpA PE=3 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 4.857e-79 Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_CAPBU (ATP synthase subunit alpha, chloroplastic OS=Capsella bursa-pastoris GN=atpA PE=3 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 4.857e-79 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETAD+PATLQYLAPYTGAALAEYFMYRE+HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL SQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADAPATLQYLAPYTGAALAEYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_SOLTU (ATP synthase subunit alpha, chloroplastic OS=Solanum tuberosum GN=atpA PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 6.344e-79 Identity = 149/153 (97.39%), Postives = 151/153 (98.69%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_SOLLC (ATP synthase subunit alpha, chloroplastic OS=Solanum lycopersicum GN=atpA PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 6.344e-79 Identity = 149/153 (97.39%), Postives = 151/153 (98.69%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_SOLBU (ATP synthase subunit alpha, chloroplastic OS=Solanum bulbocastanum GN=atpA PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 6.344e-79 Identity = 149/153 (97.39%), Postives = 151/153 (98.69%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSA 370 The following BLAST results are available for this feature:
BLAST of CX287432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287432 ID=CX287432; Name=CX287432; organism=Citrus clementina; type=EST; length=463bpback to top |