CX287432

Overview
NameCX287432
Unique NameCX287432
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length463
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_BACC1 (ATP synthase subunit alpha OS=Bacillus cereus (strain ATCC 10987) GN=atpA PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.506e-59
Identity = 110/153 (71.90%), Postives = 127/153 (83.01%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            A++YTIVV  +A  PA L YLAPY G  + E FMY  +H L++YDDLSKQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL    G GS+TALP +ETQ+GDVSAYIPTNVISITDGQIFL +DLF +G+RPAI+ G SVSRVG +
Sbjct:  217 ALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSRVGGS 369
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_BACC0 (ATP synthase subunit alpha OS=Bacillus cereus (strain AH820) GN=atpA PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.506e-59
Identity = 110/153 (71.90%), Postives = 127/153 (83.01%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            A++YTIVV  +A  PA L YLAPY G  + E FMY  +H L++YDDLSKQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL    G GS+TALP +ETQ+GDVSAYIPTNVISITDGQIFL +DLF +G+RPAI+ G SVSRVG +
Sbjct:  217 ALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSRVGGS 369
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_BACAN (ATP synthase subunit alpha OS=Bacillus anthracis GN=atpA PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.506e-59
Identity = 110/153 (71.90%), Postives = 127/153 (83.01%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            A++YTIVV  +A  PA L YLAPY G  + E FMY  +H L++YDDLSKQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL    G GS+TALP +ETQ+GDVSAYIPTNVISITDGQIFL +DLF +G+RPAI+ G SVSRVG +
Sbjct:  217 ALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSRVGGS 369
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_BACAH (ATP synthase subunit alpha OS=Bacillus thuringiensis (strain Al Hakam) GN=atpA PE=3 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 2.506e-59
Identity = 110/153 (71.90%), Postives = 127/153 (83.01%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            A++YTIVV  +A  PA L YLAPY G  + E FMY  +H L++YDDLSKQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL    G GS+TALP +ETQ+GDVSAYIPTNVISITDGQIFL +DLF +G+RPAI+ G SVSRVG +
Sbjct:  217 ALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSRVGGS 369
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_BACAC (ATP synthase subunit alpha OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=atpA PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.506e-59
Identity = 110/153 (71.90%), Postives = 127/153 (83.01%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            A++YTIVV  +A  PA L YLAPY G  + E FMY  +H L++YDDLSKQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL    G GS+TALP +ETQ+GDVSAYIPTNVISITDGQIFL +DLF +G+RPAI+ G SVSRVG +
Sbjct:  217 ALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSRVGGS 369
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_BACAA (ATP synthase subunit alpha OS=Bacillus anthracis (strain A0248) GN=atpA PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.506e-59
Identity = 110/153 (71.90%), Postives = 127/153 (83.01%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            A++YTIVV  +A  PA L YLAPY G  + E FMY  +H L++YDDLSKQA AYR++SLLLRRPPGREAYPGDVFYLHSRLLERAAKL    G GS+TALP +ETQ+GDVSAYIPTNVISITDGQIFL +DLF +G+RPAI+ G SVSRVG +
Sbjct:  217 ALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSRVGGS 369
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_ARTAT (ATP synthase subunit alpha OS=Arthrobacter aurescens (strain TC1) GN=atpA PE=3 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 2.506e-59
Identity = 109/153 (71.24%), Postives = 130/153 (84.97%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            A++YT +VA  A  PA  +YLAPY G+A+ +++MY  +H L+I+DDLSKQA+AYR +SLLLRRPPGREAYPGDVFYLHSRLLER AKL  +LG GSMT LPIVET++ DVSAYIPTNVISITDGQIFL +DLFNA  RPA++VG+SVSRVG A
Sbjct:  229 ALEYTTIVASPASDPAGFKYLAPYAGSAIGQHWMYGGKHVLVIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGAGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGVSVSRVGGA 381
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_STRGC (ATP synthase subunit alpha OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.273e-59
Identity = 110/153 (71.90%), Postives = 129/153 (84.31%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            A+DYTIVV  +A  P+ L YLAPY G A+AE FMY  +H LI+YDDLSKQA AYR++SLLLRRPPGREA+PGDVFYLHSRLLER+AK+  +LG GS+TALP +ETQ+GD+SAYI TNVISITDGQIFLS  LFN G+RPAI+ G SVSRVG +
Sbjct:  217 ALDYTIVVTASASQPSPLLYLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDGLFNGGVRPAIDAGSSVSRVGGS 369
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_MYCUA (ATP synthase subunit alpha OS=Mycobacterium ulcerans (strain Agy99) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.273e-59
Identity = 108/153 (70.59%), Postives = 130/153 (84.97%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            AMDYT +VA  A   A  ++LAPYTG+A+A+++MY  +H LI++DDL+KQA+AYR +SLLLRRPPGREAYPGDVFYLHSRLLER AKL  +LG GS+T LPI+ET++ D+SAYIPTNVISITDGQ FL  DLFN G+RPAINVG+SVSRVG A
Sbjct:  228 AMDYTTIVAAPASDSAGFKWLAPYTGSAVAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQGVRPAINVGVSVSRVGGA 380
[Close]
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_MYCMM (ATP synthase subunit alpha OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.273e-59
Identity = 108/153 (70.59%), Postives = 130/153 (84.97%), Query Frame = 3 
Query:    3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461
            AMDYT +VA  A   A  ++LAPYTG+A+A+++MY  +H LI++DDL+KQA+AYR +SLLLRRPPGREAYPGDVFYLHSRLLER AKL  +LG GS+T LPI+ET++ D+SAYIPTNVISITDGQ FL  DLFN G+RPAINVG+SVSRVG A
Sbjct:  228 AMDYTTIVAAPASDSAGFKWLAPYTGSAVAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQGVRPAINVGVSVSRVGGA 380
The following BLAST results are available for this feature:
BLAST of CX287432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_BACC12.506e-5971.90ATP synthase subunit alpha OS=Bacillus cereus (str... [more]
ATPA_BACC02.506e-5971.90ATP synthase subunit alpha OS=Bacillus cereus (str... [more]
ATPA_BACAN2.506e-5971.90ATP synthase subunit alpha OS=Bacillus anthracis G... [more]
ATPA_BACAH2.506e-5971.90ATP synthase subunit alpha OS=Bacillus thuringiens... [more]
ATPA_BACAC2.506e-5971.90ATP synthase subunit alpha OS=Bacillus anthracis (... [more]
ATPA_BACAA2.506e-5971.90ATP synthase subunit alpha OS=Bacillus anthracis (... [more]
ATPA_ARTAT2.506e-5971.24ATP synthase subunit alpha OS=Arthrobacter auresce... [more]
ATPA_STRGC3.273e-5971.90ATP synthase subunit alpha OS=Streptococcus gordon... [more]
ATPA_MYCUA3.273e-5970.59ATP synthase subunit alpha OS=Mycobacterium ulcera... [more]
ATPA_MYCMM3.273e-5970.59ATP synthase subunit alpha OS=Mycobacterium marinu... [more]

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Properties
Property NameValue
Genbank descriptionC01009E04SK Veg1 Citrus clementina cDNA clone C01009E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287432 ID=CX287432; Name=CX287432; organism=Citrus clementina; type=EST; length=463bp
GGGCAATGGACTACACTATTGTGGTAGCCGAAACGGCGGATTCCCCCGCT
ACGTTACAATACCTCGCTCCTTATACGGGCGCAGCTCTAGCTGAATATTT
TATGTACCGTGAACGACACACTTTAATCATTTATGATGATCTCTCCAAAC
AAGCACAGGCTTATCGACAAATGTCTCTTCTATTACGAAGACCACCGGGT
CGCGAAGCTTATCCCGGAGATGTTTTTTATTTGCATTCACGACTTTTGGA
AAGAGCCGCGAAATTAGGTTCGCAGTTAGGCGAAGGAAGTATGACCGCTT
TACCAATAGTTGAGACCCAGTCGGGAGATGTTTCGGCTTATATTCCTACT
AATGTAATTTCCATTACAGACGGGCAAATATTCTTATCCGCGGATTTATT
CAATGCTGGAATCAGACCCGCTATTAATGTGGGTATTTCCGTCTCTCGAG
TAGGATCCGCAGC
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