CX287439
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.264e-32 Identity = 78/136 (57.35%), Postives = 85/136 (62.50%), Query Frame = -3 Query: 189 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKK-TFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 593 AAALNIVPTST LNGIALRVPTPN + K AE+VN AFR++A LKG+L VCD PLVSVDFRC VMG DMVKV+AWYDNEWGYSQRVVDLAD+VAN W Sbjct: 286 AAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKW 421
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.935e-31 Identity = 71/136 (52.21%), Postives = 85/136 (62.50%), Query Frame = -3 Query: 186 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 593 +AALNIVPT+T LNGIALRVPTPN VSKKTF EEVN A ++A+ +KGI+ DEPLVS D+R VMGDDM+KV+AWYDNEWGYSQRVVDL +++A+ WK Sbjct: 281 SAALNIVPTTTGAAKAVALVVPTLAGKLNGIALRVPTPNVSVCDVVMQVSKKTFKEEVNGALLKAANGSMKGIIKYSDEPLVSCDYRGTDESTIIDSSLTMVMGDDMLKVVAWYDNEWGYSQRVVDLGEVMASQWK 416
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 130.954 bits (328), Expect = 4.495e-30 Identity = 74/136 (54.41%), Postives = 81/136 (59.56%), Query Frame = -3 Query: 186 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 593 AAA+NIVPTST LNGIALRVPTPN V K T AE+VN +E+A+ LKG+L D LVS DFR VMG DMVKVIAWYDNEWGYSQRVVDLA+IVA NWK Sbjct: 202 AAAVNIVPTSTGAAKAVALVIPELQGKLNGIALRVPTPNVSVVDLVVQVEKNTIAEQVNGVLKEAANTSLKGVLEYTDLELVSSDFRGTDCSSTVDGSLTMVMGGDMVKVIAWYDNEWGYSQRVVDLAEIVAKNWK 337
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.668e-30 Identity = 69/136 (50.74%), Postives = 83/136 (61.03%), Query Frame = -3 Query: 186 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 593 +AALNIVPT+T LNGIALRVPTPN V+KKTF EEVN A ++++ +KGI+ DEPLVS D R VMGDDM+KV+AWYDNEWGYSQRVVDL +++A WK Sbjct: 279 SAALNIVPTTTGAAKAVALVVPSLKGKLNGIALRVPTPNVSVCDVVMQVNKKTFKEEVNGALLKASEGAMKGIIKYSDEPLVSCDHRGTDESTIIDSSLTMVMGDDMIKVVAWYDNEWGYSQRVVDLGEVMARQWK 414
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.935e-27 Identity = 66/119 (55.46%), Postives = 73/119 (61.34%), Query Frame = -3 Query: 237 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWG 593 AAALNIVPT+T LNGIALRVPTPN V KKTFAEE+N AF+E+A L G+L+V DEPLVSVDFRC VMG DMVKV+AWYDNEWG Sbjct: 196 AAALNIVPTTTGAAKAVALVLPKLKGKLNGIALRVPTPNVSVVDLVVQVEKKTFAEEINNAFKEAAAGSLNGVLAVSDEPLVSVDFRCTDVSSTIDSSLTMVMGADMVKVVAWYDNEWG 314
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.309e-26 Identity = 64/135 (47.41%), Postives = 81/135 (60.00%), Query Frame = -3 Query: 189 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 593 AAA+NIVPTST LNG+ALRVPTPN V K+T EEVN A +++++ LKGIL + LVS D++ VMG+D+VKV+AWYDNEWGYSQRV+DLA++VA W Sbjct: 202 AAAINIVPTSTGAAKAVALVIPELKGKLNGVALRVPTPNVSMVDFVVQVEKRTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDASLTLVMGNDLVKVMAWYDNEWGYSQRVLDLAELVAEKW 336
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.309e-26 Identity = 64/135 (47.41%), Postives = 81/135 (60.00%), Query Frame = -3 Query: 189 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 593 AAA+NIVPTST LNG+ALRVPTPN V K+T EEVN A +++++ LKGIL + LVS D++ VMG+D+VKV+AWYDNEWGYSQRV+DLA++VA W Sbjct: 202 AAAINIVPTSTGAAKAVALVIPELKGKLNGVALRVPTPNVSMVDFVVQVEKRTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDANLTLVMGNDLVKVMAWYDNEWGYSQRVLDLAELVAEKW 336
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.712e-21 Identity = 61/132 (46.21%), Postives = 75/132 (56.82%), Query Frame = -3 Query: 198 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 593 AAA NI+PTST LNG A+RVPTPN ++++ AEEVNAA +E+A+ +LKGIL +EPLVS D+ VM MVKVI+WYDNE GYS RVVDLA +A Sbjct: 200 AAAENIIPTSTGAAKAVSLVLPELKGKLNGGAMRVPTPNVSLVDLVAELNQEVTAEEVNAALKEAAEGDLKGILGYSEEPLVSGDYNGNKNSSTIDALSTMVMEGSMVKVISWYDNESGYSNRVVDLAAYIA 331
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3P_BACME (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus megaterium GN=gap PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20 Identity = 59/132 (44.70%), Postives = 73/132 (55.30%), Query Frame = -3 Query: 198 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 593 AAA NI+PTST LNG A+RVPTPN + K+ E+VN A +E+A+ +LKGIL +EPLVS D+ VM +MVKVI+WYDNE GYS RVVDLA +A Sbjct: 200 AAAENIIPTSTGAAKAVSLVLPELKGKLNGGAMRVPTPNVSLVDLVAELDKEVTVEDVNNALKEAAEGDLKGILGYSEEPLVSGDYNGNINSSTIDALSTMVMEGNMVKVISWYDNESGYSNRVVDLAQYIA 331
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 1.449e-20 Identity = 58/128 (45.31%), Postives = 72/128 (56.25%), Query Frame = -3 Query: 210 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLA 593 AAA N++PTST LNG A+RVPT N + K+ EEVNAAF+ +A+ ELKGIL +EPLVS+D+ VM +MVKV++WYDNE GYS RVVDLA Sbjct: 199 AAAENMIPTSTGAAKAVALVLPELKGKLNGGAVRVPTANVSLVDLVVELDKEVTVEEVNAAFKAAAEGELKGILGYSEEPLVSIDYNGCTASSTIDALSTMVMEGNMVKVLSWYDNETGYSNRVVDLA 326 The following BLAST results are available for this feature:
BLAST of CX287439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287439 ID=CX287439; Name=CX287439; organism=Citrus clementina; type=EST; length=595bpback to top |