CX287439
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11 Identity = 39/123 (31.71%), Postives = 58/123 (47.15%), Query Frame = -3 Query: 213 NIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDL 581 NI+P ST L G+A RVPTP+ +++ + A + +A + GIL+ ++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL Sbjct: 277 NIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDL 399
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: E4PD_AERS4 (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=epd PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11 Identity = 41/126 (32.54%), Postives = 58/126 (46.03%), Query Frame = -3 Query: 216 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVD 593 AA+ +I+P T IA+RVPT N V KK +VN A + ++ L GIL +EPLVSVDF V ++VK++ W DNEWG++ R++D Sbjct: 202 AASQSIIPVDTKLAKGLERILPHFAGKFEAIAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDFNHDAHSCIIDGTQTRVSDANLVKMLMWCDNEWGFANRMLD 327
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11 Identity = 41/126 (32.54%), Postives = 58/126 (46.03%), Query Frame = -3 Query: 216 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVD 593 AA+ +I+P T IA+RVPT N V KK +VN A + ++ L GIL +EPLVSVDF V ++VK++ W DNEWG++ R++D Sbjct: 202 AASQSIIPVDTKLAKGLERILPHFAGKFEAIAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDFNHDAHSCIIDGTQTRVSDANLVKMLMWCDNEWGFANRMLD 327
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11 Identity = 40/116 (34.48%), Postives = 53/116 (45.69%), Query Frame = -3 Query: 243 AALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNE 590 AA NI+P +T L G+A RVPTPN + K +E+ A +E+A+ LKGIL DE +VS DF + D VK+I+WYDNE Sbjct: 189 AAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNE 304
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11 Identity = 42/132 (31.82%), Postives = 61/132 (46.21%), Query Frame = -3 Query: 198 NIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNEL----KGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 581 NI+P ST L G+A RVPT + + K+T ++V A R++AD + KGI+ +E +VS DF + +K++AWYDNEWGY++RV D VA Sbjct: 203 NIIPASTGAAKAVTKAIPDLEGKLTGLAFRVPTLDVSVVDLVVRLEKETSYDDVKKAMRDAADGKHPGIEKGIVDYTEEDVVSTDFVGSNYSMIFDAKAGIALNSRFMKLVAWYDNEWGYARRVCDEVVYVA 334
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: E4PD_SHEAM (D-erythrose-4-phosphate dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=epd PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11 Identity = 40/128 (31.25%), Postives = 56/128 (43.75%), Query Frame = -3 Query: 210 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLA 593 AA+ +I+P T I++RVPT N + + VNAA + +AD GIL DEPLVS DF V +VK++ W DNEWG++ R++D A Sbjct: 202 AASQSIIPVDTKLARGIERILPQMKDKFEAISVRVPTINVTAIDLSVTLDTRVDIATVNAALKAAADGSASGILGYTDEPLVSCDFNHDPRSSVVDGTQTRVSAGHLVKMLLWCDNEWGFANRMLDTA 329
BLAST of CX287439 vs. ExPASy Swiss-Prot
Match: E4PD_SHEFN (D-erythrose-4-phosphate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=epd PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.972e-11 Identity = 37/126 (29.37%), Postives = 56/126 (44.44%), Query Frame = -3 Query: 216 AAALNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVD 593 AA +I+P T I++RVPT N + KK E++N+ + +++ GIL DEPLVS DF V +VK++ W DNEWG++ R++D Sbjct: 202 AAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLEKKVNIEQINSVLQRASNGSFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGHLVKLLLWCDNEWGFANRMLD 327 The following BLAST results are available for this feature:
BLAST of CX287439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287439 ID=CX287439; Name=CX287439; organism=Citrus clementina; type=EST; length=595bpback to top |