CX287441

Overview
NameCX287441
Unique NameCX287441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT21_ARATH (Sulfate transporter 2.1 OS=Arabidopsis thaliana GN=SULTR2;1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.428e-15
Identity = 48/130 (36.92%), Postives = 74/130 (56.92%), Query Frame = 1
Query:   19 YTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGY-DVARSSKIVPLIKSIILGADKFSWPP--FLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIV 399
            Y +L +      GIF++  GL RLG+L+ F+SHA I GF   +AIVI L Q K  LG  +   ++ IV +++++     +  W P  F++G   L+ +LI + +GK  K L +L A  PL  VV+ T +V
Sbjct:  196 YKKLVLTTTFFAGIFQASFGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITNFTTNTDIVSVLRAVWRSCQQ-QWSPHTFILGCSFLSFILITRFIGKKYKKLFWLPAIAPLIAVVVSTLMV 324          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT3_STYHA (Low affinity sulfate transporter 3 OS=Stylosanthes hamata GN=ST3 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.395e-15
Identity = 49/141 (34.75%), Postives = 73/141 (51.77%), Query Frame = 1
Query:    1 DSSDESYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGY-DVARSSKIVPLIKSI-------ILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIV 399
            D+    Y  L   + L  GIF++  G+LRLG+L+ F+SHA + GF   +AIVI L Q K  LG       +  V ++KS+       I  ++ +S   F++G   L  LL  + +G+  K   +L A  PL  V+L T IV
Sbjct:  147 DAHPNDYRNLVFTVTLFAGIFQTAFGVLRLGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLLGLTHFTTKTDAVAVLKSVYTSLHQQITSSENWSPLNFVIGCSFLIFLLAARFIGRRNKKFFWLPAIAPLLSVILSTLIV 287          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT31_ARATH (Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.442e-14
Identity = 42/148 (28.38%), Postives = 76/148 (51.35%), Query Frame = 1
Query:   19 YTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGY-DVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPP--SITLVGDIPQGL 453
            Y  LA       G+ E+ +G+ RLG+++ F+SHA I GF   +A V++L Q K   G      S+ ++ +++S+     ++ W   ++G   L  LL  +     +    ++ A  PLT V+LG+ +V   H     + ++GD+ +GL
Sbjct:  163 YLHLAFTATFFAGVLEASLGIFRLGFIVDFLSHATIVGFMGGAATVVSLQQLKGIFGLKHFTDSTDVISVMRSVFSQTHEWRWESGVLGCGFLFFLLSTRYFSIKKPKFFWVAAMAPLTSVILGSLLVYFTHAERHGVQVIGDLKKGL 310          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT1_STYHA (High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.282e-14
Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 1
Query:    1 DSSDESYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGY---DVARSSKIVPLIKSIILGADK-FSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKI 405
            ++    Y  LA       G+ + ++G+ RLG+LI F+SHA I GF   +AI I L Q K  LG    +  + + I+ +++S+       ++W   L+G   L  LLI K + K  K L ++ A  P+  V++ T  V I
Sbjct:  178 NTKSHDYLRLAFTATFFAGVTQMLLGVCRLGFLIDFLSHAAIVGFMAGAAITIGLQQLKGLLGISNNNFTKKTDIISVMRSVWTHVHHGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMISVIVSTFFVYI 316          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT35_ARATH (Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.858e-13
Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = 1
Query:   13 ESYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLG-YDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPS--ITLVGDIPQGL 453
            E Y  L     L+ G+F+  MG LRLG L+ F+SH+ I+GF   +AI+I L Q K   G       + +V ++ SI+    ++ W   L G   L  L   + + +    L ++ A GP+  VV+G  +  +    +  I  VG + +GL
Sbjct:  156 ELYLHLIFTATLITGLFQFAMGFLRLGILVDFLSHSTITGFMGGTAIIILLQQLKGIFGLVHFTHKTDVVSVLHSILDNRAEWKWQSTLAGVCFLVFLQSTRYIKQRYPKLFWVSAMGPMVVVVVGCVVAYLVKGTAHGIATVGPLKKGL 305          
The following BLAST results are available for this feature:
BLAST of CX287441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SUT21_ARATH6.428e-1536.92Sulfate transporter 2.1 OS=Arabidopsis thaliana GN... [more]
SUT3_STYHA8.395e-1534.75Low affinity sulfate transporter 3 OS=Stylosanthes... [more]
SUT31_ARATH5.442e-1428.38Sulfate transporter 3.1 OS=Arabidopsis thaliana GN... [more]
SUT1_STYHA9.282e-1431.65High affinity sulfate transporter 1 OS=Stylosanthe... [more]
SUT35_ARATH7.858e-1330.67Probable sulfate transporter 3.5 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC01009F01SK Veg1 Citrus clementina cDNA clone C01009F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287441 ID=CX287441; Name=CX287441; organism=Citrus clementina; type=EST; length=505bp
GATTCATCTGATGAGTCATACACAGAACTTGCAATATTATTGGCTCTCAT
GGTTGGAATATTTGAATCCATTATGGGTCTCTTGAGGCTTGGATGGCTTA
TCCGTTTCATCAGCCATGCTGTGATCTCTGGCTTTACCACTGCTTCAGCC
ATTGTAATTGCACTGTCTCAAGCAAAGTACTTTTTGGGATATGATGTTGC
ACGTAGTAGTAAGATTGTGCCATTGATCAAGAGCATAATATTAGGAGCAG
ATAAGTTTTCGTGGCCCCCTTTTCTAGTGGGATCTATCATTCTTGCTATA
CTTCTGATCATGAAGCAATTGGGAAAATCAAGGAAGTACTTGAGGTTCCT
ACGAGCAGCAGGTCCCTTGACAGGAGTTGTTTTGGGTACAACCATTGTGA
AAATATATCATCCACCATCCATTACTTTGGTAGGAGATATACCTCAGGGG
CTCCCAAACTTTTCAATCCCTAAAAGTTTTGAGTGTGCAATGTCTTTAAT
TCCTA
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