CX287451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20 Identity = 45/71 (63.38%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR +++L+R+ENK QVTF+KRR+GL+KKA ELSVLCD ++AL++FS+RG+LYEFCS S+ LERYQ Sbjct: 1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQ 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.552e-20 Identity = 45/71 (63.38%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR +++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ ++ L+RYQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQ 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.552e-20 Identity = 46/71 (64.79%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR +++L+RIE K QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ S+ LERYQ Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQ 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.639e-20 Identity = 56/115 (48.70%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGY-------SSLQLLKIVQRQLEG 354 MGR K+ LQRIENK QVTF+KRR+GL+KKA ELS+LCD ++ALV+FS GRLY+F S+ ++ LERYQ I A+ AP +++ Q Y + +++L+ QR L G Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAA-APTSDEMQNNYQEYVNLKAHVEILQQSQRNLLG 114
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.639e-20 Identity = 62/159 (38.99%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADS-LASILERYQSRITEEAVASGAPKAEDPQAGY-------SSLQLLKIVQRQLEGPNFEQFTAADXXXXXXXXXXXXXXIRAVKVHSYAHWASLVQTQ 483 MGR K++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ S +A +++Y+ A A+D Q Y S +++L+ QR L G + + IR+ K S S ++T+ Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKH--SYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTK 157
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.059e-20 Identity = 44/71 (61.97%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR +++L+RIENK QVTF+KRR+GL+KKA ELSVLCD +++L++FS+RG+LYEFCS ++ LERYQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQ 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.059e-20 Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSLQLLKIVQRQLEGPNFEQFTAADXXXXXXXXXXXXXXIRAVKVHSYAHWASLVQTQLMMGSIRT 507 MGRKK++++RIENKS QVTFSKRR+GLI+KAR+LS+LC+ +A+++ S G+LY+ S D+++ I++RY+ +E A AE + +LL+IVQ +LE N + + RA K T+LMMG +++ Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYEIHHADELEA--LDLAEKTRNYLPLKELLEIVQSKLEESNVDNASVDTLISLEEQLETALSVTRARK------------TELMMGEVKS 145
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.913e-20 Identity = 53/120 (44.17%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS----RITEEAVASGAPKAEDPQAGYS-SLQLLKIVQRQLEGPNFEQFT 375 M R + +L+RIEN + QVTFSKRR+GL+KKA ELSVLCD ++AL++FS RGRLYEF SA SL ++RY++ + + + + +D G + L+ L +R++ G N E F+ Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.350e-19 Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGY---------SSLQLLKIVQRQLEGPNFEQFTAAD 384 MGR K++++RIENK+ QVTF KRR+GL+KKA EL++LCD ++AL++FSSRGRLYEF + +S S +ERY+ + + AP + Y +Q L+ R L G + TA + Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKK--ASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKE 125
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.350e-19 Identity = 54/120 (45.00%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGY--------SSLQLLKIVQRQLEGPNFE 366 MGR K+QL+RIENK QVTFSKRRSGL+KKA E+SVLCD ++AL+IFS++G+LYE+ + + ILERY+ E V A D Q + + ++ ++ Q+ L G + E Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISA--ESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLE 118 The following BLAST results are available for this feature:
BLAST of CX287451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287451 ID=CX287451; Name=CX287451; organism=Citrus clementina; type=EST; length=621bpback to top |