CX287451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 45/72 (62.50%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS 246 MGR K++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RGRL+EF ++ + LERY+S Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRS 72
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 45/72 (62.50%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS 246 MGR K++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RGRL+EF ++ + LERY+S Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRS 72
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.749e-19 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 MGR ++QL+RIENK QVTFSKRRSGL+KKA E+SVLCD ++ALVIFSS+G+L+E+ + + ILERY Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERY 70
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.143e-18 Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSA-DSLASILERYQ----SRITE 258 MGR K++++RIEN + QVTFSKRR GL+KKA ELSVLCD +L L+IFSS G+L+E+ SA S+ I+ERYQ +RITE Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGARITE 81
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.143e-18 Identity = 44/71 (61.97%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR +++L+ IENK QVTF+KRR L+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ S+ LE+YQ Sbjct: 1 MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQ 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.492e-18 Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS-RITEEAVASGAPKAE 291 MGR K+QL+RIENK QVTFSKRR+GL+KKA E+SVLCD ++A ++FS +G+LYE+ + + ILERY+ E+A+ S ++E Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESE 88
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18 Identity = 52/120 (43.33%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGY--------SSLQLLKIVQRQLEGPNFE 366 MGR K+QL+RIEN QVTFSKRRSGL+KKA E+SVLCD ++AL+IFS++G+LY++ + + ILERY+ E V A D Q + + ++ ++ Q+ L G + E Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISA--ESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLE 118
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18 Identity = 43/70 (61.43%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 MGR ++QL+RIENK QVTFSKRRSGL+KKA E+SVLCD ++AL++FSS+G+L+E+ + + ILERY Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERY 70
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.546e-18 Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEA-VASGAPKAEDPQAGYSSL----QLLKIVQRQLEGPNFEQFTAAD 384 MGR K+ ++RI+N QVTFSKRR GL+KKAREL++LCD D+ L++FS GRLY+F S+ S+ SI+ERYQ E + + +A+ Q ++L Q L RQL G FT D Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRD 122
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.325e-18 Identity = 44/88 (50.00%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 25 QKMGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKA 288 +K+GR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++AL++FS+RGRLYE+ + +S+ +ERY+ T+ S +A Sbjct: 15 RKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYAN-NSVKGTIERYKKACTDSPNTSSVSEA 101 The following BLAST results are available for this feature:
BLAST of CX287451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287451 ID=CX287451; Name=CX287451; organism=Citrus clementina; type=EST; length=621bpback to top |