CX287451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 4.342e-18 Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYS--------SLQLLKIVQRQLEGPNFEQFTAAD 384 MGR +++L+RIENK QVTFSKRR+GL+KKA+E+SVLCD +++L++FS +G+L+E+ S + +LERY+ E + Q +S ++LL+ QR G E + D Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKD 126
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.342e-18 Identity = 44/80 (55.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 25 QKMGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEA 264 +K GR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++AL++FSSRGRLYE+ S +S+ +ERY+ I++ + Sbjct: 15 RKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKKAISDNS 93
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 4.342e-18 Identity = 44/80 (55.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 25 QKMGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEA 264 +K GR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++AL++FSSRGRLYE+ S +S+ +ERY+ I++ + Sbjct: 15 RKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKKAISDNS 93
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 5.671e-18 Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGY---------SSLQLLKIVQRQLEGPNFEQFTAADXXXXXXXXXXXXXXIRAVK 441 MGR +++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++AL++FSSRGRLYE+ + +++ + ++RY+ + SGAP E Y +Q+L+ + L G N + + IRA K Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYK-KAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARK 145
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.671e-18 Identity = 42/71 (59.15%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR ++QL+RIENK QVTFSKRR+GL+KKA E+SVLCD ++ALV+FS +G+L+E+ + + ILERY+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYE 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 5.671e-18 Identity = 42/71 (59.15%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR ++QL+RIENK QVTFSKRR+GL+KKA E+SVLCD ++ALV+FS +G+L+E+ + + ILERY+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYE 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.671e-18 Identity = 41/71 (57.75%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR ++QL+RIENK QVTFSKRRSGL+KKA E+SVLCD ++ L++FS++G+L+E+ + + ILERY+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYE 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.671e-18 Identity = 51/116 (43.97%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 1 SQSRAALGQKMGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSLQLLKIVQRQL 348 S A +K+GR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++ALVIFS+RGRLYE+ + +S+ +ERY+ ++ A P + Y + K+ +RQ+ Sbjct: 6 SSHDAESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYAN-NSVRGTIERYKKACSD---AVNPPSVTEANTQYYQQEASKL-RRQI 116
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.407e-18 Identity = 42/80 (52.50%), Postives = 65/80 (81.25%), Query Frame = 1 Query: 25 QKMGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEA 264 +K+GR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++AL++FSSRGRLYE+ + +S+ + +ERY+ ++ + Sbjct: 15 RKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN-NSVKATIERYKKACSDSS 93
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.407e-18 Identity = 42/80 (52.50%), Postives = 65/80 (81.25%), Query Frame = 1 Query: 25 QKMGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEA 264 +K+GR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++AL++FSSRGRLYE+ + +S+ + +ERY+ ++ + Sbjct: 15 RKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN-NSVKATIERYKKACSDSS 93 The following BLAST results are available for this feature:
BLAST of CX287451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287451 ID=CX287451; Name=CX287451; organism=Citrus clementina; type=EST; length=621bpback to top |