CX287451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.674e-18 Identity = 43/88 (48.86%), Postives = 67/88 (76.14%), Query Frame = 1 Query: 25 QKMGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKA 288 +K+GR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++ALV+FS+RGRLYE+ + +S+ + +ERY+ ++ + +A Sbjct: 15 RKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYAN-NSVKATIERYKKACSDSSNTGSVSEA 101
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.674e-18 Identity = 40/71 (56.34%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR ++QL+RIENK QVTFSKRRSGL+KKA E+SVLCD ++ L++FS++G+L+E+ + + +LERY+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYE 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.674e-18 Identity = 40/71 (56.34%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR ++QL+RIENK QVTFSKRRSGL+KKA E+SVLCD ++ L++FS++G+L+E+ + + +LERY+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYE 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.263e-17 Identity = 43/70 (61.43%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 M R+K+Q+++I+N + QVTFSKRR GL KKA ELSVLCD D+AL+IFSS G+L+EFCS+ S+ +LER+ Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS-SMKEVLERH 69
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.263e-17 Identity = 42/71 (59.15%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCS-ADSLASILERY 240 MGR K++++RIENK+ QVTFSKRR+GL+KK ELSVLCD + L+IFSS+G+L+E+CS S++ I+ RY Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRY 74
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.263e-17 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 MGR +++++RIENK QVTFSKRR+GL+KKA ELSVLCD ++AL+IFSSRG+LYEF S + S +ERY Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV-GIESTIERY 69
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.263e-17 Identity = 45/86 (52.33%), Postives = 65/86 (75.58%), Query Frame = 1 Query: 1 SQSRAALGQKMGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITE 258 S A +K+GR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++ALVIFS+RGRLYE+ + +S+ +ERY+ ++ Sbjct: 6 SNEVAESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYAN-NSVRGTIERYKKACSD 90
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.263e-17 Identity = 45/104 (43.27%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSLQLLKIVQR 342 MGR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++AL++FS+RGRLYE+ + +++ S +ERY+ ++ ++ ++ A Y + K+ Q+ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYAN-NNIRSTIERYKKACSD---STNTSTVQEINAAYYQQESAKLRQQ 100
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.650e-17 Identity = 43/71 (60.56%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR K++++RIEN + QVTF KRR+GL+KKA ELSVLCD ++AL++FSSRGRLYE+ + +S+ S +ERY+ Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN-NSVKSTVERYK 70
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.650e-17 Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSL--QLLKIVQR--QLEGPNFEQFT 375 MGR K++++RIEN + QVTFSKRRSGL+KKARELSVLCD ++A+++FS G+L+E+ S+ + L RY + +S A KAE+ A L QL K+ ++ QL+G T Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRYGNH-----QSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLT 113 The following BLAST results are available for this feature:
BLAST of CX287451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287451 ID=CX287451; Name=CX287451; organism=Citrus clementina; type=EST; length=621bpback to top |