CX287451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.155e-17 Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGA 279 M R K+Q++RIEN QVTF KRR GL+KKARELSVLCD D+ ++IFSS+G+L+E + ++ +++ERYQS + + GA Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGA 83
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.155e-17 Identity = 43/70 (61.43%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 MGR K++++RI+N + QVTFSKRRSGL KKARELS+LCD ++ L++FSS RLY+F S+ S+ SI+ERY Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS-SMKSIIERY 69
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.676e-17 Identity = 47/84 (55.95%), Postives = 66/84 (78.57%), Query Frame = 1 Query: 25 QKMG-RKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVAS 273 +K+G R K++++RIEN + QVTF KRRSGL+KKA ELSVLCD ++ALV+FSSRGRLYE+ S +S+ +ERY+ ++ + AS Sbjct: 40 EKIGSRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEY-SNNSVKETIERYKKANSDTSNAS 122
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.801e-17 Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAE------DPQAGYSSLQLLKIVQRQLEGPNFEQ 369 M R K Q++RIEN + QVTFSKRR+GL+KKA ELSVLCD ++AL++FS RG+LYEF SA S +ERY++ T+E + + + + D L+ L+ +R+L G ++ Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA-STQKTIERYRT-YTKENIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDE 117
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.801e-17 Identity = 43/88 (48.86%), Postives = 69/88 (78.41%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY-QSRITEEAVASGAPKAE 291 MGR K+ +QRI++ + QVTFSKRR GLIKKA+EL++LCD ++ L+IFSS G+LY+F S+ S+ S+++RY +S+I ++ + + A + + Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS-SMKSVIDRYNKSKIEQQQLLNPASEVK 87
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 6.270e-17 Identity = 43/82 (52.44%), Postives = 67/82 (81.71%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY-QSRITEEAVAS 273 MGR K+ ++RI+N + QVTFSKRR+G+ KKA+EL++LCD ++ L+IFSS GRLYE+ S+ S+ S+++RY +S+ ++AVA+ Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY-SSTSMKSVIDRYGKSKDEQQAVAN 81
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.270e-17 Identity = 42/72 (58.33%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCS-ADSLASILERYQ 243 MGR K++++RIEN + QVTFSKRR GL+KKA EL+VLCD + +VIFSS G+++E+CS A SL ++E+YQ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQ 72
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 8.189e-17 Identity = 43/83 (51.81%), Postives = 64/83 (77.11%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGA 279 MGR K+ ++RI+N + QVTFSKRR+GL+KKA+ELS+LCD ++ LV+FSS GRLYEF S+ ++ ++++RY + EE + A Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF-SSTNMKTVIDRY-TNAKEELLGGNA 81
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.070e-16 Identity = 40/75 (53.33%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCS-ADSLASILERYQSRI 252 MGR K++++RIEN + QVT+SKRR+G++KKAREL+VLCD +A+++FSS G+ +EFCS + + I +RYQ I Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAI 75
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.824e-16 Identity = 41/73 (56.16%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSAD-SLASILERYQS 246 MGR K++++RIEN + QVTFSKRR GL+KKA EL+VLCD + +VIFSS G+++E+CS SL ++E YQ+ Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQT 73 The following BLAST results are available for this feature:
BLAST of CX287451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287451 ID=CX287451; Name=CX287451; organism=Citrus clementina; type=EST; length=621bpback to top |