CX287451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.824e-16 Identity = 50/127 (39.37%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSA-DSLASILERYQ--------SRITEEAVASGAPKAEDPQAGYSSLQLLKIVQRQLEGPNFEQFTAAD 384 MGR K+Q++RIEN+ QVTFSKRR GL+KKA E++VLCDVD+A ++FS++G L+ + S+ ++ ILE+Y + + EE + D ++ LK QR L G + T D Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQD 127
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.064e-16 Identity = 44/93 (47.31%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSAD-SLASILERY--QSRITEEAVASGAPKAEDPQ 300 MGR K++++RIEN + QVTFSKRRSGL+KK ELSVLCD + L++FS++G+L E+C+ S+ I++RY I E P A++ Q Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQ 93
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.308e-16 Identity = 38/71 (53.52%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADS-LASILERY 240 MGR K+++++IEN++ QVTFSKRR+GLIKK RELS+LCD + L++FS+ G+L EFCS + + +++RY Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRY 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.308e-16 Identity = 50/108 (46.30%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQ-AGYSSLQLLKIVQRQLE 351 M R K Q++RIEN + QVTFSKRR+GL+KKA ELSVLCD +++L+IFS +G+LYEF S+ ++ ++RY R T++ V++ E+ Q Y + ++K ++ QLE Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS-NMQDTIDRY-LRHTKDRVSTKPVSEENMQHLKYEAANMMKKIE-QLE 105
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 5.308e-16 Identity = 40/78 (51.28%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADS------LASILERYQS 246 MGR K++++RIEN + QVTFSKRR+G++KKARE+ VLCD ++ +VIFSS G+L ++C+ + L+ ILE+YQ+ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQT 78
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.933e-16 Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILER 237 M R+K+Q+++I+N + QVTFSKRR GL KKA ELSVLCD D+AL+IFSS G+L+++ S+ S+ ILER Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDY-SSSSMKQILER 68
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.054e-16 Identity = 37/71 (52.11%), Postives = 59/71 (83.10%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCS-ADSLASILERY 240 MGR K++++RIEN S QVT+SKRR+G++KKA+E+SVLCD ++++IF+S G+++EFCS + +L +L+ Y Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHY 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.544e-15 Identity = 37/72 (51.39%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCS-ADSLASILERYQ 243 MGR K++++RIEN S QVT+SKRR+G+IKKA+E++VLCD ++L+IF + G+++E+CS + +L +L+ YQ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQ 72
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.544e-15 Identity = 38/70 (54.29%), Postives = 59/70 (84.29%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 MGR K++++RIEN S QVT+SKRR+G++KKA+E+SVLCD ++++IF+S G+++EF S+ SL IL++Y Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQY 69
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.544e-15 Identity = 38/70 (54.29%), Postives = 59/70 (84.29%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 MGR K++++RIEN S QVT+SKRR+G++KKA+E+SVLCD ++++IF+S G+++EF S+ SL IL++Y Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQY 69 The following BLAST results are available for this feature:
BLAST of CX287451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287451 ID=CX287451; Name=CX287451; organism=Citrus clementina; type=EST; length=621bpback to top |