CX287451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.544e-15 Identity = 41/70 (58.57%), Postives = 56/70 (80.00%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 MGR K++++RIENK QVTFSKR+SGL+KKA ELSVLCD +++L+IFS+ G+LYEF + + +ERY Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV-GVGRTIERY 69
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15 Identity = 40/70 (57.14%), Postives = 56/70 (80.00%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 MGR K++++RIEN + QVTFSKRR+GL+KKA ELSVLCD ++A+++FS G+L+EF S+ S+ L RY Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF-SSTSMKKTLLRY 69
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 5.869e-15 Identity = 39/77 (50.65%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEE 261 MGR K+ +Q+I++ + QVTFSKRR GLIKKA+EL++LCD ++ L+IFS+ +LY+F S+ S+ S +ER+ + EE Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS-SVKSTIERFNTAKMEE 76
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.001e-14 Identity = 36/72 (50.00%), Postives = 57/72 (79.17%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSAD-SLASILERYQ 243 MGR K++++RIEN + VTFSKRR+GL+KKA+E++VLCD +AL+IF+S G++ ++C L ++L++YQ Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQ 72
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.001e-14 Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 1 Query: 4 QSRAALGQKMGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS 246 + RAA G+ R+++ ++RI+N + QVTFSKRR GL KKA ELS+LCD ++ LV+FS+ G+L++F S S+ I++RY S Sbjct: 14 EGRAATGK---RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAST-SMEQIIDRYNS 90
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.001e-14 Identity = 49/129 (37.98%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDP----------------QAGYSSLQLLKIVQRQLEGPNFEQ 369 M R++ +++RIE+ + QVTFSKRR GL KKA ELSVLCD D+AL++FSS G+L F S+ S+ I+++Y + ++ KAE P Q +SL+L ++ +LEG + ++ Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS-SMNEIIDKYNTH------SNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDE 122
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.001e-14 Identity = 36/70 (51.43%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERY 240 M R K+QL+RIEN QVTF KRR+GL+KKA+ELSVLCD ++ +VIFS +G+L+E + ++ ++++Y Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKY 70
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.708e-14 Identity = 36/72 (50.00%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSAD-SLASILERYQ 243 MG+ K++++RIE+ +R QVTFSKRR+G +KKA EL+VLCD + +V+FS +G+L++FCS L + RY+ Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYE 72
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MEF2B_MOUSE (Myocyte-specific enhancer factor 2B OS=Mus musculus GN=Mef2b PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.230e-14 Identity = 45/115 (39.13%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSLQLLKIVQRQ---LEGPNFE 366 MGRKK+Q+ RI ++ QVTF+KR+ GL+KKA ELSVLCD D+AL+IF+S RL+++ S+D ++R + TE + +P ++ +L+ ++R+ L+GP + Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCDIALIIFNSAQRLFQYASSD-----MDRVLLKYTEYS---------EPHESRTNADILQTLKRRGVGLDGPELD 101
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.230e-14 Identity = 45/115 (39.13%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSLQLLKIVQRQ---LEGPNFE 366 MGRKK+Q+ RI ++ QVTF+KR+ GL+KKA ELSVLCD ++AL+IF+S RL+++ S D ++R + TE + +P ++ +L+ ++R+ L+GP E Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTD-----MDRVLLKYTEYS---------EPHESRTNTDILETLKRRGIGLDGPELE 101 The following BLAST results are available for this feature:
BLAST of CX287451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287451 ID=CX287451; Name=CX287451; organism=Citrus clementina; type=EST; length=621bpback to top |