CX287461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: TOM1_DICDI (Target of Myb protein 1 OS=Dictyostelium discoideum GN=tom1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.713e-16 Identity = 48/125 (38.40%), Postives = 78/125 (62.40%), Query Frame = 3 Query: 213 MVNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVK-IARKKPDTHVKEKILILIDTWQEAFGGPRARYPQYY 584 MV +VD+AT+++LI DW ++I D+LN DP A+ VV+ + K++ R S+V LLAL L +++++NC H++ AE+ E+ + I KK +VKEK L ++++W AF R P +Y Sbjct: 1 MVTELVDKATNELLIQTDWTTVLQISDILNRDPIHARGVVRQVTKKLKDR-SRVILLALELADSLLQNC-HCTHVYFAERTFQTELCRLIMNKKTKLNVKEKTLEIVESWGNAFQA-RHDVPGFY 122
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: STAM2_MOUSE (Signal transducing adapter molecule 2 OS=Mus musculus GN=Stam2 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.283e-13 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 228 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 551 V++AT++ DW++ ++ICD + P AKD +K I KR+ + V L ALTLL + NCG I H+ V ++ E+ + + K V EK+ L+ W E F Sbjct: 13 VEKATNEYNTTEDWSLIMDICDRVGSTPSGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRSVIKNKAHPKVCEKLKSLMVEWSEEF 120
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: STAM2_RAT (Signal transducing adapter molecule 2 OS=Rattus norvegicus GN=Stam2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.676e-13 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 228 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 551 V++AT++ DW++ ++ICD + P AKD +K I KR+ + V L ALTLL + NCG I H+ V ++ E+ + + K V EK+ L+ W E F Sbjct: 13 VEKATNEYNTTEDWSLIMDICDRVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEF 120
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: STAM2_HUMAN (Signal transducing adapter molecule 2 OS=Homo sapiens GN=STAM2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.676e-13 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 228 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 551 V++AT++ DW++ ++ICD + P AKD +K I KR+ + V L ALTLL + NCG I H+ V ++ E+ + + K V EK+ L+ W E F Sbjct: 13 VEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEF 120
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: VPS27_YARLI (Vacuolar protein sorting-associated protein 27 OS=Yarrowia lipolytica GN=VPS27 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.319e-13 Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 216 VNSMVDRATSDMLIG--PDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARK-KPDTHVKEKILILIDTWQEAFGG 557 ++ V++ATS+ L D A+N+EICD++ AKD ++ +K+R+ +RN VQL AL L + IKN G + +A + + ++ IAR + V++++L L+ W AF G Sbjct: 10 IDEQVEKATSESLPSGESDLALNLEICDLIRSKTVPAKDAMRSLKRRLLNRNPNVQLAALQLTDVCIKNGGSHFLVEIASREFVDPLMAIARNDDANPEVRQRVLQLLQQWAVAFAG 126
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: VPS27_PHANO (Vacuolar protein sorting-associated protein 27 OS=Phaeosphaeria nodorum GN=VPS27 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.419e-12 Identity = 43/128 (33.59%), Postives = 65/128 (50.78%), Query Frame = 3 Query: 186 WLGESERAEMVNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARK----KPDTHVKEKILILIDTWQEAFGG 557 W G S + + ++RATS L D +N+EI D++ Q KD +K +KKRIG +N VQL L L +T +KN G +A + + + + + P+ VK K+L LI +W A G Sbjct: 4 WFGSSTNSAF-DEQIERATSSSL--EDMPLNLEISDVIRSKTVQPKDAMKSLKKRIGHKNPNVQLATLNLTDTCVKNGGAHFIQEIASREFMDNLTSLLKAPSTIAPNNDVKNKMLELIQSWATAAEG 128
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: HRS_DROME (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Drosophila melanogaster GN=Hrs PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.161e-12 Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 3 Query: 228 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 551 ++ ATS + + PDW + ICD +N K+ IKK++ S N +L +LE+I+KNCG VH V K P +V++K+L L+ TW AF Sbjct: 10 LENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAF 117
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: HSE1_USTMA (Class E vacuolar protein-sorting machinery protein HSE1 OS=Ustilago maydis GN=HSE1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.392e-12 Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 225 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQA-KDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTH--VKEKILILIDTWQEAF 551 +V +ATSD L +W +N+E+CD ++ A ++ + I+KR+ RN+ VQL ALTL + + KNCG H +A ++ + +I + +TH VK++ L+ W F Sbjct: 11 IVLKATSDELTSENWELNLEVCDKVSSGGDTAARNCIAAIQKRLVHRNANVQLYALTLADAVAKNCGLAAHQEIASRSFTQTLARICLDR-NTHSTVKKRCSALVKEWAGEF 121
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: HSE1_COCIM (Class E vacuolar protein-sorting machinery protein HSE1 OS=Coccidioides immitis GN=HSE1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.392e-12 Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 3 Query: 219 NSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTH--VKEKILILIDTWQEAF 551 + +V +AT + L +W +++CD ++ D AKD V + KR+ RN+ VQL L + +NCG H +A K+ ++++A + +TH VK KIL ++ W E F Sbjct: 10 DDIVAKATDENLTSENWEYILDVCDKVSADESGAKDAVASMIKRLAHRNANVQLYTFELANALSQNCGPKAHRELASKSFTDALLRLANDR-NTHPQVKSKILEHMEQWTEMF 121
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: HSE1_EMENI (Class E vacuolar protein-sorting machinery protein hse1 OS=Emericella nidulans GN=hse1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.198e-12 Identity = 36/110 (32.73%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 228 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTH--VKEKILILIDTWQEAF 551 V +AT + L +W +++CD + + AKD V + KR+ RN+ VQL L L + +NCG +H +A ++ ++++A + +TH VK KIL ++ W E F Sbjct: 13 VAKATDENLTSENWEYILDVCDKVGAEESGAKDAVAALIKRLAHRNANVQLYTLELANALAQNCGPKIHRELASRSFTDALLRLAGDR-NTHQQVKSKILERMEDWTEMF 121 The following BLAST results are available for this feature:
BLAST of CX287461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287461 ID=CX287461; Name=CX287461; organism=Citrus clementina; type=EST; length=589bpback to top |