CX287462 | Citrus Genome Database

Overview


Name	CX287462
Unique Name	CX287462
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	560

Libraries


Library Name	Type
Veg1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 295.049 bits (754), Expect = 1.597e-79
Identity = 136/165 (82.42%), Postives = 153/165 (92.73%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDPYK  P++++N+PF TTN+GAPVWN+N S+TVG RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDIS+LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSH
Sbjct:    1 MDPYKYRPASSYNSPFFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSH 165

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 2.086e-79
Identity = 137/165 (83.03%), Postives = 150/165 (90.91%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDPYK   S+  N PF TTN+GAPVWN+N SLTVG+RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+RD +KFPD++HA KPNPKSH
Sbjct:    1 MDPYKYRSSSAFNTPFWTTNSGAPVWNNNSSLTVGTRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSH 165

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 2.086e-79
Identity = 136/165 (82.42%), Postives = 148/165 (89.70%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDP K  PS++ +    TTNAG PVWNDN +LTVG RGP+LLEDYHL+EK+AHFARERIPERVVHARGASAKGFFECTHD++ LTCAD  RAPG +TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAFKPNPKSH
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNAGQPVWNDNEALTVGPRGPILLEDYHLLEKIAHFARERIPERVVHARGASAKGFFECTHDVTGLTCADFLRAPGARTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSH 165

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 2.724e-79
Identity = 137/165 (83.03%), Postives = 150/165 (90.91%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDPYK  PS++ N P  TTN G PV+NDN SLTVG+RGPVLLEDY L++KLAHF RERIPERVVHARGA+AKGFFE THD+SHLTCAD  RAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+D++GN+ PVFFIRDAIKFPDVIHAFKPNPKSH
Sbjct:    1 MDPYKYCPSSSFNTPHTTTNGGHPVYNDNSSLTVGTRGPVLLEDYQLIDKLAHFTRERIPERVVHARGATAKGFFEVTHDVSHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDIVGNNFPVFFIRDAIKFPDVIHAFKPNPKSH 165

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 6.069e-79
Identity = 136/165 (82.42%), Postives = 152/165 (92.12%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDPYK  PS++ ++PF TTN+GAPVWN+N SLTVG+RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDIS LTCAD  RAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSH
Sbjct:    1 MDPYKFRPSSSFDSPFWTTNSGAPVWNNNSSLTVGARGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISQLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSH 165

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 1.035e-78
Identity = 138/165 (83.64%), Postives = 149/165 (90.30%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDPYK  PS+  N+PF TTN+GAPVWN+N SLTVG RG  LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSH
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPVWNNNSSLTVGPRGQYLLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSH 165

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.352e-78
Identity = 135/165 (81.82%), Postives = 149/165 (90.30%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDPYK  PS+  N+PF TTN+GAPVWN+N SLTVGSRGP+LLEDYHLVEKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+ D + FPD++HA KPNP++H
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPVWNNNSSLTVGSRGPILLEDYHLVEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNYDLVGNNFPVFFVHDGMNFPDMVHALKPNPQTH 165

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 3.012e-78
Identity = 137/165 (83.03%), Postives = 151/165 (91.52%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDPYK  PS+  N+PF TTN+GAPV+N+N SLTVG+RGPVLLEDYHLVEKLA+F RERI ERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSH
Sbjct:    1 MDPYKYRPSSAFNSPFCTTNSGAPVFNNNSSLTVGARGPVLLEDYHLVEKLANFDRERIAERVVHARGASAKGFFEVTHDIAHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSH 165

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 5.138e-78
Identity = 136/165 (82.42%), Postives = 152/165 (92.12%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDPYK   S+ +NAPF TTN+GAPV+N+N+SLTVGSRGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDI+ LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++H+ KPNPKSH
Sbjct:    1 MDPYKYRSSSAYNAPFWTTNSGAPVYNNNNSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITALTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHSLKPNPKSH 165

[Close]

BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 6.710e-78
Identity = 133/165 (80.61%), Postives = 151/165 (91.52%), Query Frame = 3

Query:   66 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            MDPYK  PS+  N+ F TTN+GAPVWN+N +LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKPNPK++
Sbjct:    1 MDPYKHRPSSGSNSSFWTTNSGAPVWNNNSALTVGQRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPNPKTN 165

The following BLAST results are available for this feature:

BLAST of CX287462 vs. ExPASy Swiss-Prot

BLAST of CX287462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141


Match Name	E-value	Identity	Description
CATA2_ARATH	1.597e-79	82.42	Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV...	[more]
CATA_SOLAP	2.086e-79	83.03	Catalase OS=Soldanella alpina PE=2 SV=1	[more]
CATA2_HORVU	2.086e-79	82.42	Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2...	[more]
CATA_AVIMR	2.724e-79	83.03	Catalase OS=Avicennia marina PE=2 SV=1	[more]
CATA2_GOSHI	6.069e-79	82.42	Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P...	[more]
CATA1_GOSHI	1.035e-78	83.64	Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P...	[more]
CATA_PEA	1.352e-78	81.82	Catalase OS=Pisum sativum PE=2 SV=1	[more]
CATA2_SOLLC	3.012e-78	83.03	Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2...	[more]
CATA_HELAN	5.138e-78	82.42	Catalase OS=Helianthus annuus PE=2 SV=1	[more]
CATA1_MAIZE	6.710e-78	80.61	Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1	[more]

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Properties


Property Name	Value
Genbank description	C01009G10SK Veg1 Citrus clementina cDNA clone C01009G10, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX287462 ID=CX287462; Name=CX287462; organism=Citrus clementina; type=EST; length=560bp
AACTCCACTTCTCCTTTCTTACGATAATAATAACAGTAGCAAAATCTTCA
GCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTCAACTACTCA
CAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCTGGAACGACA
ATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTGAGGATTAT
CATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAACG
TGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCACCC
ATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGGTT
CAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGCAG
CCCTGAGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACACCA
GAGAGGGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCATC
CGTGATGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAATCC
AAAGTCTCAC