CX287462

Overview
NameCX287462
Unique NameCX287462
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.560e-41
Identity = 84/167 (50.30%), Postives = 108/167 (64.67%), Query Frame = 3
Query:   57 NIAMDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKS 557
            N  ++  +   +   N  + TTN G  + +D +SL  G RGP LLED+ L EK+ HF  ERIPER+VHARG  A G+F    D S LT AD       +TPV +R STV   RGS +T+RD  GFAVKFYT EGN+DL+GN++PVFFI+DA  FPD +HA K  P++
Sbjct:    2 NKKLEQLEKFKTNDKNPVYSTTNTGVSLSDDANSLKAGPRGPTLLEDFVLREKITHFDHERIPERIVHARGTGAHGYFLSYKDHSKLTKADFLSKQDKKTPVFIRISTVQGPRGSADTVRDVHGFAVKFYTDEGNYDLVGNNMPVFFIQDASSFPDFVHAVKMEPQN 168          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATB_ASPFU (Catalase B OS=Aspergillus fumigatus GN=catB PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.119e-40
Identity = 82/148 (55.41%), Postives = 101/148 (68.24%), Query Frame = 3
Query:  102 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKP 545
            N  FMT++ G P+  D +SL+ G RGP LLED+   +K+  F  ER+PER VHARGA A G F    D S++T A      G QTPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD+IHA KP
Sbjct:   51 NDAFMTSDVGGPI-EDQNSLSAGERGPTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLAKEGKQTPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKP 197          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.252e-40
Identity = 81/148 (54.73%), Postives = 101/148 (68.24%), Query Frame = 3
Query:  102 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKP 545
            N  F+T++ G P+  D +SL VG RGP LLED+   +K+  F  ER+PER VHARG  A G F    D S++T A    A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD+IHA KP
Sbjct:   50 NDTFLTSDVGGPI-EDQNSLQVGDRGPTLLEDFIFRQKIQRFDHERVPERAVHARGVGAHGVFTSYGDYSNITAASFLGAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKP 196          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.253e-40
Identity = 77/149 (51.68%), Postives = 109/149 (73.15%), Query Frame = 3
Query:  114 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            +TT AGAPV ++ +  T G RGP+LL+D   +EKLAHF RE IPER +HA+G++A G F  THDI+  T A +F   G +T + +RFSTV  ERG+ +  RD RGF+++FYT +GNWDL+GN+ PVF++RD +KFPD+ H  K +P+++
Sbjct:    7 LTTAAGAPVVDNQNVQTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSAAYGTFTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTN 155          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.237e-39
Identity = 79/149 (53.02%), Postives = 109/149 (73.15%), Query Frame = 3
Query:  114 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            +T + G  + ++ +SL+ G++GP+L++DY L+EKLAH  RERIPER VHA+G+ A G  + T D+S  T A +F+  G  TP+ +RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ P FFIRDA KFPD IH  K +P++H
Sbjct:    4 LTNDFGNIIADNQNSLSAGTKGPLLMQDYLLLEKLAHQNRERIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQK-GEITPLFLRFSTVAGEAGAADAERDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTH 151          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATB_EMENI (Catalase B OS=Emericella nidulans GN=catB PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.616e-39
Identity = 79/145 (54.48%), Postives = 100/145 (68.97%), Query Frame = 3
Query:  111 FMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKP 545
            ++TT+ G P+  D  SL  G+RG  LLED+   +K+  F  ER+PER VHARGA A G F    D S++T A    A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI+FPD+IHA KP
Sbjct:   52 YLTTDVGGPI-EDQQSLKAGARGSTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLSAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIQFPDLIHAVKP 195          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_CANTR (Peroxisomal catalase OS=Candida tropicalis GN=POX9 PE=1 SV=4)

HSP 1 Score: 161.77 bits (408), Expect = 2.110e-39
Identity = 81/152 (53.29%), Postives = 101/152 (66.45%), Query Frame = 3
Query:  105 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            AP  T + G P+     +  VG  GP+LL+D++L++ LAHF RERIPERVVHA+G+ A G FE T DI+ +  A      G +T +  RFSTV  E GS +T RDPRGFA KFYT EGN DL+ N+ PVFFIRD  KFP  IH  K NP++H
Sbjct:    2 APTFTNSNGQPIPEPFATQRVGQHGPLLLQDFNLIDSLAHFDRERIPERVVHAKGSGAYGVFEVTDDITDVCAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKFYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETH 153          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.600e-39
Identity = 77/144 (53.47%), Postives = 102/144 (70.83%), Query Frame = 3
Query:  129 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            GAPV +  +S+T G RGP+L++D + +E++AHF RE IPER +HA+G+ A G F  T+DI+  TCA +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   FP + H  K NPK++
Sbjct:   10 GAPVSDRENSMTAGPRGPLLMQDIYFLEQMAHFDREVIPERRMHAKGSGAFGTFTVTNDITKYTCASIFAEVGKQTEMFARFSTVAGERGAGDAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFPSLNHVVKRNPKTN 153          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_CANAL (Peroxisomal catalase OS=Candida albicans GN=CTA1 PE=2 SV=4)

HSP 1 Score: 159.844 bits (403), Expect = 8.019e-39
Identity = 80/152 (52.63%), Postives = 100/152 (65.79%), Query Frame = 3
Query:  105 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            AP  T + G P+     +  VG  GP+LL+D++L++ LAHF RERIPERVVHA+G+ A G FE T DI+ +  A      G +T +  RFSTV  E GS +T RDPRGFA K YT EGN DL+ N+ PVFFIRD  KFP  IH  K NP++H
Sbjct:    2 APTFTNSNGQPIPEPFATQRVGQHGPLLLQDFNLIDSLAHFDRERIPERVVHAKGSGAYGVFEVTDDITDICAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKIYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETH 153          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.333e-38
Identity = 79/149 (53.02%), Postives = 104/149 (69.80%), Query Frame = 3
Query:  114 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            +T   GAPV ++ +SLT G RGP+L +D  L EKLA F RE IPER +HA+G+ A G F  THDI+  T A +F   G +T +  RF+TV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF+RD  KFPD+  A K +P+++
Sbjct:   15 LTMGNGAPVADNQNSLTAGPRGPLLAQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFLRDPRKFPDLNKAVKRDPRTN 163          
The following BLAST results are available for this feature:
BLAST of CX287462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATB_DICDI6.560e-4150.30Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CATB_ASPFU1.119e-4055.41Catalase B OS=Aspergillus fumigatus GN=catB PE=1 S... [more]
CATB_ASPOR4.252e-4054.73Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]
CATA_PSEAE7.253e-4051.68Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATA_CAMJE1.237e-3953.02Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATB_EMENI1.616e-3954.48Catalase B OS=Emericella nidulans GN=catB PE=2 SV=... [more]
CATA_CANTR2.110e-3953.29Peroxisomal catalase OS=Candida tropicalis GN=POX9... [more]
CATA_STAXY3.600e-3953.47Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATA_CANAL8.019e-3952.63Peroxisomal catalase OS=Candida albicans GN=CTA1 P... [more]
CATA_HAEIN2.333e-3853.02Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC01009G10SK Veg1 Citrus clementina cDNA clone C01009G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287462 ID=CX287462; Name=CX287462; organism=Citrus clementina; type=EST; length=560bp
AACTCCACTTCTCCTTTCTTACGATAATAATAACAGTAGCAAAATCTTCA
GCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTCAACTACTCA
CAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCTGGAACGACA
ATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTGAGGATTAT
CATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAACG
TGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCACCC
ATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGGTT
CAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGCAG
CCCTGAGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACACCA
GAGAGGGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCATC
CGTGATGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAATCC
AAAGTCTCAC
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