CX287462

Overview
NameCX287462
Unique NameCX287462
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  129 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P+++
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTN 156          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_STAAN (Catalase OS=Staphylococcus aureus (strain N315) GN=katA PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  129 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P+++
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTN 156          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_STAAM (Catalase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=katA PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  129 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P+++
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTN 156          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_STAAC (Catalase OS=Staphylococcus aureus (strain COL) GN=katA PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  129 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P+++
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTN 156          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  129 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P+++
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTN 156          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  129 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P+++
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTN 156          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  129 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P+++
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTN 156          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_BOTFU (Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 78/152 (51.32%), Postives = 93/152 (61.18%), Query Frame = 3
Query:  108 PFMTTNAGAPVWNDNHSLTVGS--RGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKS 557
            P +TT  GAPV     +  +G+  R  +LL+D +L+E + H   ERIPERVVHARG SA G+FE T DIS +T A      G QT +  RFSTV     S ET+RD RGFA K +T EGN D L  S PVF IRD  KFP   HA K NP+S
Sbjct:   11 PAITTMNGAPVLKPASTQRIGNQLRATLLLQDINLLELIQHITHERIPERVVHARGTSAHGYFEVTDDISDVTSAAFLNRVGKQTDIFCRFSTVAGRAESAETVRDTRGFAFKMFTEEGNLDWLFLSTPVFPIRDGAKFPSFTHATKKNPRS 162          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATB_STAAA (Catalase-like protein OS=Staphylococcus aureus subsp. anaerobius GN=katB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.465e-32
Identity = 69/144 (47.92%), Postives = 96/144 (66.67%), Query Frame = 3
Query:  129 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +   D RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P+++
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAESDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTN 156          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_NEIGO (Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.154e-31
Identity = 76/152 (50.00%), Postives = 98/152 (64.47%), Query Frame = 3
Query:   93 TTHNAPF--MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFK 542
            TT   P   +T N GAPV ++ +SLT G+RGP+L +D  L EKLA F RE IPER +HA+G+ A G F  T DI+  T A +F   G +T +  R +TV  ERG+    R  RGFA+KFYT EGNWD++GN+ PVF+  D  KFPD+  A K
Sbjct:    2 TTSKCPVTHLTMNNGAPVADNQNSLTAGTRGPLLTQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTRDITKYTRAKIFSEVGKKTEMFGRLATVAGERGADAYTR-VRGFALKFYTEEGNWDVVGNNTPVFY-PDLRKFPDLNKAVK 151          
The following BLAST results are available for this feature:
BLAST of CX287462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_STAAR2.952e-3348.61Catalase OS=Staphylococcus aureus (strain MRSA252)... [more]
CATA_STAAN2.952e-3348.61Catalase OS=Staphylococcus aureus (strain N315) GN... [more]
CATA_STAAM2.952e-3348.61Catalase OS=Staphylococcus aureus (strain Mu50 / A... [more]
CATA_STAAC2.952e-3348.61Catalase OS=Staphylococcus aureus (strain COL) GN=... [more]
CATA_STAAB2.952e-3348.61Catalase OS=Staphylococcus aureus (strain bovine R... [more]
CATA_STAA82.952e-3348.61Catalase OS=Staphylococcus aureus (strain NCTC 832... [more]
CATA_STAA32.952e-3348.61Catalase OS=Staphylococcus aureus (strain USA300) ... [more]
CATA_BOTFU2.952e-3351.32Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 ... [more]
CATB_STAAA1.465e-3247.92Catalase-like protein OS=Staphylococcus aureus sub... [more]
CATA_NEIGO6.154e-3150.00Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC01009G10SK Veg1 Citrus clementina cDNA clone C01009G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287462 ID=CX287462; Name=CX287462; organism=Citrus clementina; type=EST; length=560bp
AACTCCACTTCTCCTTTCTTACGATAATAATAACAGTAGCAAAATCTTCA
GCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTCAACTACTCA
CAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCTGGAACGACA
ATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTGAGGATTAT
CATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAACG
TGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCACCC
ATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGGTT
CAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGCAG
CCCTGAGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACACCA
GAGAGGGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCATC
CGTGATGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAATCC
AAAGTCTCAC
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