CX287462

Overview
NameCX287462
Unique NameCX287462
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 1.612e-47
Identity = 91/152 (59.87%), Postives = 114/152 (75.00%), Query Frame = 3
Query:  108 PF-MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            PF +TT+ GAP++N   SLTVG RGP+LL+D   ++++AHF RERIPERVVHA+G  A GFFE T DI+    AD+F   G +TP+ +RFSTV  E GS +T RDPRGFA+KFYT EGNWDL+GN+ P+FFIRD I FP+ IH  K NP +H
Sbjct:   23 PFVLTTSNGAPIFNKKASLTVGPRGPLLLQDVVFLDEMAHFDRERIPERVVHAKGGGAHGFFEVTDDITKYCKADVFSTIGKRTPIFIRFSTVGGELGSADTQRDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIFFPNFIHTQKRNPVTH 174          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 2.750e-47
Identity = 88/149 (59.06%), Postives = 114/149 (76.51%), Query Frame = 3
Query:  114 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            +TT  G PV +  +SLTVG RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDA+ FP  IH+ K NP++H
Sbjct:   27 LTTGGGNPVGDKLNSLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTH 175          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 3.591e-47
Identity = 90/156 (57.69%), Postives = 118/156 (75.64%), Query Frame = 3
Query:   93 TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            T +    +T + GA V ++ +S T G++GPVLL+D  L++KL  F RERIPERVVHARG   KG F  + DIS L+ A +F++ G +TPV VRFS+V+H   SPETLRDP GFA KFYT +GNWDL+GN+ P FFIRDAIKFPD++HAFKP+P+++
Sbjct:   23 TVYATDTLTRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTASADISDLSKATVFKS-GEKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTN 177          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.045e-46
Identity = 90/149 (60.40%), Postives = 112/149 (75.17%), Query Frame = 3
Query:  114 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            +TT +GAPV ++ +S + G RGP+LL+D+HL+EKLAHF RE IPER VHA+G+ A G F  T DI+  T A LF   G QT   +RFSTV  ERGS +T RDPRGFAVKFYT EGNWD++GN+ PVFFIRD +KFPD IH  K +P+S+
Sbjct:    5 LTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTRDITGYTSAKLFEQVGKQTETFLRFSTVGGERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSN 153          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_PIG (Catalase OS=Sus scrofa GN=CAT PE=1 SV=4)

HSP 1 Score: 185.652 bits (470), Expect = 1.365e-46
Identity = 86/149 (57.72%), Postives = 113/149 (75.84%), Query Frame = 3
Query:  114 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            +TT +G P+ +  + LT G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDAI FP  IH+ K NP++H
Sbjct:   27 LTTGSGNPIGDKLNILTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRFSKAKVFEHVGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTH 175          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_MOUSE (Catalase OS=Mus musculus GN=Cat PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 1.365e-46
Identity = 86/149 (57.72%), Postives = 113/149 (75.84%), Query Frame = 3
Query:  114 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            +TT  G P+ +  + +T GSRGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDAI FP  IH+ K NP++H
Sbjct:   27 LTTGGGNPIGDKLNIMTAGSRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTH 175          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_HUMAN (Catalase OS=Homo sapiens GN=CAT PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 1.365e-46
Identity = 88/152 (57.89%), Postives = 114/152 (75.00%), Query Frame = 3
Query:  105 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            A  +TT AG PV +  + +TVG RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD I FP  IH+ K NP++H
Sbjct:   24 ADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTH 175          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.782e-46
Identity = 89/149 (59.73%), Postives = 112/149 (75.17%), Query Frame = 3
Query:  114 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            +TT +G PV ++ +S + G RGP+LL+D+HL+EKLAHF RE IPER VHA+G+ A G F  T DI+  T A LF + G QTP  +RFSTV  ERGS +T RDPRGFA+KFYT EGNWD++GN+ PVFFIRD +KFPD IH  K  P+S+
Sbjct:    7 LTTASGPPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTQDITQYTSAKLFDSVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSN 155          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 2.328e-46
Identity = 87/152 (57.24%), Postives = 114/152 (75.00%), Query Frame = 3
Query:  105 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            A  +TT AG PV +  + +TVG RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD + FP  IH+ K NP++H
Sbjct:   24 ADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTH 175          
BLAST of CX287462 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.040e-46
Identity = 85/149 (57.05%), Postives = 111/149 (74.50%), Query Frame = 3
Query:  114 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSH 560
            +TT AG P+ +  +++T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G  TP++VRFSTV  E GSP+T+RDPRGFAVKFYT EGNWDL GN+ P FFIRD +  P  IH+ K NP++H
Sbjct:   27 LTTGAGVPIGDKLNAMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHVGKTTPIVVRFSTVAGEAGSPDTVRDPRGFAVKFYTDEGNWDLTGNNTPTFFIRDTLLSPSFIHSQKRNPQTH 175          
The following BLAST results are available for this feature:
BLAST of CX287462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_ASCSU1.612e-4759.87Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_BOVIN2.750e-4759.06Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATB_PSESY3.591e-4757.69Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_PSEPU1.045e-4660.40Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]
CATA_PIG1.365e-4657.72Catalase OS=Sus scrofa GN=CAT PE=1 SV=4[more]
CATA_MOUSE1.365e-4657.72Catalase OS=Mus musculus GN=Cat PE=1 SV=3[more]
CATA_HUMAN1.365e-4657.89Catalase OS=Homo sapiens GN=CAT PE=1 SV=3[more]
CATA_ONCVE1.782e-4659.73Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATA_PONAB2.328e-4657.24Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_DANRE3.040e-4657.05Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC01009G10SK Veg1 Citrus clementina cDNA clone C01009G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287462 ID=CX287462; Name=CX287462; organism=Citrus clementina; type=EST; length=560bp
AACTCCACTTCTCCTTTCTTACGATAATAATAACAGTAGCAAAATCTTCA
GCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTCAACTACTCA
CAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCTGGAACGACA
ATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTGAGGATTAT
CATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAACG
TGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCACCC
ATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGGTT
CAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGCAG
CCCTGAGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACACCA
GAGAGGGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCATC
CGTGATGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAATCC
AAAGTCTCAC
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