CX287487

Overview
NameCX287487
Unique NameCX287487
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.356e-22
Identity = 57/170 (33.53%), Postives = 93/170 (54.71%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*-----LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRET--PTLFKRISVVDH 496
            Y  E++ LA K+++ M + L  +   +K+ F    Q       ++++YPPCP+ + V G+ +H DA  + +L   +Q+ GLQ+ KDG+ + V+PL DA ++N GD +EV +NG Y+S  HR    S   + S A+FY   L   + PA    T E   P L+ +    D+
Sbjct:  115 YREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEAAPPALYPKFLFGDY 284          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.313e-22
Identity = 54/154 (35.06%), Postives = 93/154 (60.39%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNG---VQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRA-TVNSMKKKLSFATFYGAKLDGELGPAPSLITRE 457
            +  +L+NLA ++LD + + L ++   +K+ F          +++ YPPCP+P+ + G+ +H DA  + +L   +++ GLQ+ KDG  + V P+  A +VN+GD LEV TNG Y+S+ HR  T  S   ++S A+FY    D  + PAP+L+ ++
Sbjct:  117 FAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKD 270          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.313e-22
Identity = 56/173 (32.37%), Postives = 97/173 (56.07%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGE---LGPAPSLITRETPTLFKRISVVDHFKRFFSR 517
            Y  E+  L   + + +++AL ++ N +K++       L  +YYPPCPQP+  +G+  H D S LTILL  + + GLQ+  D   V V P+P A +VN+GD+L++ TN  + S+EHR   N    ++S A F+ + L       GP   +++ E P  ++  ++ ++ K + S+
Sbjct:  181 YSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQ-DHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSK 352          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22
Identity = 52/153 (33.99%), Postives = 93/153 (60.78%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELF--GNGVQ*-LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRE 457
            + ++++ L+ ++LD + + L ++   +K  F   NG     +++ YPPCP+P+ + G+ +H DA  + +L   +++ GLQ+ KDG  V V P+  + +VN+GD LEV TNG Y+S+ HR    +   ++S A+FY    D  + PAP+L+ +E
Sbjct:  123 FAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKE 275          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22
Identity = 52/161 (32.30%), Postives = 94/161 (58.39%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*---LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRI 481
            +   L+ LA ++LD + + L ++   +K+ F          +++ YPPCP+P+ + G+ +H DA  + +L   +++ GLQ+ KDG+ + V P+  + +VN+GD LEV TNG Y+S+ HR    +   ++S A+FY    D  + PAP+L+ +E     K++
Sbjct:  117 FAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQV 277          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.946e-22
Identity = 54/171 (31.58%), Postives = 103/171 (60.23%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVN-SMKKKLSFATFY--GAKLDGEL-GPAPSLITRETPTLFKRISVVDHFKRF 508
            Y  ++ NL   + + +++AL ++PN + ++  +    +  +YYPPCP+P+  +G + H D S LT+LLP +Q++GLQ++++G    V  +  A I+NIGD+L++ TN  + S+EHR   N + + ++S A F+  G + +  + GP   L++ E P  ++  ++ D+   F
Sbjct:  184 YSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLP-DQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETTIKDYATYF 353          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.731e-22
Identity = 52/161 (32.30%), Postives = 93/161 (57.76%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*---LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRI 481
            +   L+ LA ++LD + + L ++ + +K  F          +++ YPPCP+P+ + G+ +H DA  + +L   +++ GLQ+ KDG+ + V P+  + +VN+GD LEV TNG Y+S+ HR        ++S A+FY    D  + PAP+L+ +E     K++
Sbjct:  117 FRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQV 277          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.731e-22
Identity = 51/151 (33.77%), Postives = 91/151 (60.26%), Query Frame = 2
Query:   17 ELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*---LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRET 460
            EL+ LA K+LD + + L ++   +K+ F          +++ YPPCP+P+ + G+ +H DA  + +L   +++ GLQ+ KDG+ + V P+  + ++N+GD +EV TNG Y+S+ HR    S   ++S A+FY    D  + PAP+L+  ++
Sbjct:  120 ELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEKS 270          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.731e-22
Identity = 51/153 (33.33%), Postives = 89/153 (58.17%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*---LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRE 457
            +   L+ LA ++LD + + L ++   +K  F          +++ YPPCP+P+ + G+ +H DA  + +L   +++ GLQ+ KDG+ + V P+  + +VN+GD LEV TNG Y+S+ HR        ++S A+FY    D  + PAP+L+ +E
Sbjct:  117 FAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKE 269          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.790e-22
Identity = 52/154 (33.77%), Postives = 94/154 (61.04%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*----LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRE 457
            +   L+ LA ++LD + + L ++   +K++F  G +      +++ YPPCP+P+ + G+ +H DA  + +L   +++ GLQ+ KDG+ + V P+  + +VN+GD LEV TNG Y+S+ HR    +   ++S A+FY    D  + PAP+L+ +E
Sbjct:  117 FAKRLEKLAEELLDLLCENLGLEKGYLKKIF-YGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKE 269          
The following BLAST results are available for this feature:
BLAST of CX287487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO_MUSAC1.356e-2233.531-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO1_CUCME2.313e-2235.061-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCH1_ARATH2.313e-2232.371-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO_DIACA3.021e-2233.99Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO3_PETHY3.021e-2232.301-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCH3_ARATH3.946e-2231.581-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO2_SOLLC6.731e-2232.301-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO2_MALDO6.731e-2233.771-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_PETHY6.731e-2233.331-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_TOBAC8.790e-2233.771-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]

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Properties
Property NameValue
Genbank descriptionC01010B01SK Veg1 Citrus clementina cDNA clone C01010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287487 ID=CX287487; Name=CX287487; organism=Citrus clementina; type=EST; length=557bp
GGAAGTTTACTTATCAGAACTGAAAAATCTTGCCCTGAAAATCCTTGATC
AAATGGCTAAAGCTCTAAGAATGGATCCTAATGATATGAAAGAGTTGTTT
GGAAACGGGGTACAATAATTAAGGATGAATTATTATCCTCCTTGTCCGCA
ACCAGAGCAAGTTATCGGCATTAATTCCCATTGTGATGCCTCCGCACTTA
CCATCCTCCTCCCAATCAATCAGATGGATGGTCTCCAAATAAAGAAAGAT
GGAAAATTGGTTGCTGTTAGACCCCTTCCAGATGCCTTTATAGTCAACAT
TGGAGACATTTTAGAGGTTTTTACCAATGGAATTTACCGTAGTATGGAAC
ATCGTGCAACTGTGAACTCAATGAAGAAAAAATTATCTTTTGCTACATTT
TATGGTGCAAAATTAGATGGAGAATTGGGTCCAGCACCAAGTCTTATTAC
TCGAGAGACACCAACATTATTTAAGAGGATAAGTGTGGTAGATCACTTTA
AAAGATTTTTTTCAAGAGCTACGTGGAAAATCATTTTTTGATTTCTTGAG
AATTCAA
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