CX287487

Overview
NameCX287487
Unique NameCX287487
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.227e-20
Identity = 55/170 (32.35%), Postives = 97/170 (57.06%), Query Frame = 2
Query:    2 EVYLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDG--KLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRISVVDHFKR 505
            E Y ++L  LA  +L  +++A+ ++   + +   +  Q + +NYYP CPQP+  +G+  H D   +T+LL  +Q+ GLQ  +DG    + V+P+P AF+VN+GD     +NG +++ +H+A VNS   +LS ATF     D  + P  ++   E   + + I+  D ++R
Sbjct:  159 EEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYPL-AIREGENSIMEEPITFADLYRR 326          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.075e-19
Identity = 55/184 (29.89%), Postives = 92/184 (50.00%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPND---MKELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRISVVDHFKRFFSRATWKIIF*FLE 550
            Y  E+  L+L++++ + ++L +  +     +  F      +R+NYYP C +P   +G   HCD ++LTIL   + + GL++  +G+  A+RP P A +VN+GD     +N  YRS  HRA VNS   + S A F   ++D  + P   L+              DH  R +   TW+ +  F +
Sbjct:  174 YCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQ-DHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVD-------------DHHPRVYPDFTWRALLDFTQ 343          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.833e-19
Identity = 53/151 (35.10%), Postives = 86/151 (56.95%), Query Frame = 2
Query:    2 EVYLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDG--KLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLI 448
            E Y   L  LA K+L+ +++A+ ++   + +   +  Q + +NYYP CPQP+  +G+  H D   +T+LL  +Q+ GLQ  +DG    + V+P+  AF+VN+GD     +NG +++ +H+A VNS   +LS ATF          PAP  I
Sbjct:  156 EEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSSTSRLSIATFQ--------NPAPEAI 297          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.833e-19
Identity = 49/154 (31.82%), Postives = 89/154 (57.79%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*----LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRE 457
            +   L+ LA  +LD + + L ++   +K+ F  G +      ++  YPPCP+ + + G+ +H DA  + +L   +++ GLQ+ KD + + V P+  + ++N+GD LEV TNG Y+S+ HR    +   ++S A+FY    D  + PAP+L+ +E
Sbjct:  117 FAERLEKLAEYLLDLLCENLGLEKGYLKKAF-YGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKE 269          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.394e-19
Identity = 53/165 (32.12%), Postives = 87/165 (52.73%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMD----PNDMKELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQ--IKKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRIS 484
            Y  E++ L +++LD + + L +      N++ +     +Q +  NYYPPCP P   +G   H D + +T+L     + GLQ  I KD   +AV+P+P AF+VN+G  L+V TN  +    HR   +  + ++S AT  G      + PA  L+ ++ P L+K  S
Sbjct:  161 YSVEVRKLTMRMLDYICEGLGLKLGYFDNELSQ-----IQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQ--QDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELLNQDNPPLYKPYS 318          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.083e-19
Identity = 54/174 (31.03%), Postives = 95/174 (54.60%), Query Frame = 2
Query:    2 EVYLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKD--GKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRISVVDHFKRFFSR 517
            E Y  +L  LA K+L+ +++A+ ++   +     +  Q + +NYYP CPQP+  +G+  H D   +T+LL  +Q+ GLQ  +D     + V+P+  AF+VN+GD     +NG +++ +H+A VNS   +LS ATF     +  + P   +   E   + + I+  + +KR   R
Sbjct:  157 EEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPL-KVREGEKAIMEEPITFAEMYKRKMGR 328          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.333e-19
Identity = 55/179 (30.73%), Postives = 96/179 (53.63%), Query Frame = 2
Query:    2 EVYLSELKNLALKILDQMAKALRM-DPNDMKELFGN--GVQ*LRMNYYPPCPQPE----QVIGINSHCDASALTILLPINQMDGLQI-KKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRISVVDHFKRFFS 514
            E Y++ +KN+   +L+ MA+ L +   N +  L  +       R+N+YPPCP+ +     ++G   H D   +++L   N   GLQI   DG  V+V P   +F +N+GD L+V TNG ++S++HR   ++ K +LS   F G  L   + P PS++ +    L+K  +  ++ K  ++
Sbjct:  138 ENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRS-NSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYFGGPALSENIAPLPSVMLKGEECLYKEFTWCEYKKAAYT 315          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.333e-19
Identity = 56/158 (35.44%), Postives = 85/158 (53.80%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*------LRMNYYPPCPQ----PEQVIGINSHCDASALTILLPINQMDGLQIK-KDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLI 448
            Y   ++N+A +ILD MA+ L++ P   K +F   V         R+N+YP CP+     E +IG   H D   ++IL   N   G QI  +DG  ++V P   +F +N+GD L+V TNG ++S+ HR   N +  +LS   F G  L  ++ P PSL+
Sbjct:  136 YKCAMRNMACEILDLMAEGLKIQP---KNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISILRS-NNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLM 289          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.333e-19
Identity = 48/133 (36.09%), Postives = 82/133 (61.65%), Query Frame = 2
Query:    8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDG--KLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATF 400
            Y  +L  LA K+L+ +++A+ +D + +     +  Q + +N+YP CPQP+  +G+  H D   +T+LL  +Q+ GLQ  +DG    + V+P+  AF+VN+GD     +NG +++ +H+A VNS   +LS ATF
Sbjct:  161 YSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATF 292          
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.965e-19
Identity = 52/155 (33.55%), Postives = 90/155 (58.06%), Query Frame = 2
Query:    2 EVYLSELKNLALKILDQMAKALRMDPNDMKELFGN----GVQ*-LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQI-KKDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLI 448
            E Y   ++ LA K++     +L ++  D++    N    G Q  +++N+YP CP+P++ +G+ +H D++ +TIL   N   GLQ+ + D   V   P+P + +VN+GD+L + TNGI+ S+ HRA VN ++ + S A  +G   D  + P P L+
Sbjct:  161 EEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQ-NNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWGPPSDIMISPLPKLV 314          
The following BLAST results are available for this feature:
BLAST of CX287487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FL3H_DIACA8.227e-2032.35Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
GAOX1_ORYSJ1.075e-1929.89Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
FL3H_CALCH1.833e-1935.10Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
ACCO_DIOKA1.833e-1931.821-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
HY6H_HYONI2.394e-1932.12Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
FL3H_MATIN4.083e-1931.03Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
G2OX_PHACN5.333e-1930.73Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G2OX1_PEA5.333e-1935.44Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
FL3H_VITVI5.333e-1936.09Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
G3OX2_ARATH6.965e-1933.55Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC01010B01SK Veg1 Citrus clementina cDNA clone C01010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287487 ID=CX287487; Name=CX287487; organism=Citrus clementina; type=EST; length=557bp
GGAAGTTTACTTATCAGAACTGAAAAATCTTGCCCTGAAAATCCTTGATC
AAATGGCTAAAGCTCTAAGAATGGATCCTAATGATATGAAAGAGTTGTTT
GGAAACGGGGTACAATAATTAAGGATGAATTATTATCCTCCTTGTCCGCA
ACCAGAGCAAGTTATCGGCATTAATTCCCATTGTGATGCCTCCGCACTTA
CCATCCTCCTCCCAATCAATCAGATGGATGGTCTCCAAATAAAGAAAGAT
GGAAAATTGGTTGCTGTTAGACCCCTTCCAGATGCCTTTATAGTCAACAT
TGGAGACATTTTAGAGGTTTTTACCAATGGAATTTACCGTAGTATGGAAC
ATCGTGCAACTGTGAACTCAATGAAGAAAAAATTATCTTTTGCTACATTT
TATGGTGCAAAATTAGATGGAGAATTGGGTCCAGCACCAAGTCTTATTAC
TCGAGAGACACCAACATTATTTAAGAGGATAAGTGTGGTAGATCACTTTA
AAAGATTTTTTTCAAGAGCTACGTGGAAAATCATTTTTTGATTTCTTGAG
AATTCAA
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