CX287487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.028e-14 Identity = 46/169 (27.22%), Postives = 88/169 (52.07%), Query Frame = 2 Query: 2 EVYLSELKNLALKILDQMAKALRMDPNDM------KELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDG--KLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRIS 484 E + E++ LA K+L+ AL + + +++ + +N+YP CP P++ +G+ +H D+ T +L + + GLQ+ + G + V V +P A +VN+GD+ ++ TNG + S+ HRA VN ++S F G ++ P + TP ++ ++ Sbjct: 164 EEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALA-GTPAAYRAVT 330
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14 Identity = 50/172 (29.07%), Postives = 90/172 (52.33%), Query Frame = 2 Query: 2 EVYLSELKNLALKILDQMAKALRMDPNDMKELF----GNGVQ*----LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIK----KDGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRI 481 E Y + +L+ +++ + +L + D+ L G+G L++N YP CP P +G+ H D+S LTIL N + GL+I+ + + + V P+ + +V +GD+ + +NG +RS HRA VN ++S A F G + ++GP S + P +++R+ Sbjct: 159 EEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGN-IPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGPPKNLQIGPLTS--DKNHPPIYRRL 327
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14 Identity = 38/124 (30.65%), Postives = 70/124 (56.45%), Query Frame = 2 Query: 119 LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKKDG--KLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRIS 484 + +N+YP CP P++ +G+ +H D+ T +L + + GLQ+ + G + V V +P A +VN+GD+ ++ TNG + S+ HRA VN ++S F G ++ P + TP ++ ++ Sbjct: 209 MHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALA-GTPAAYRAVT 330
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13 Identity = 53/174 (30.46%), Postives = 86/174 (49.43%), Query Frame = 2 Query: 8 YLSELKNLALKILDQMAKALRM-DPNDMKELFGN--GVQ*LRMNYYPPCPQ-------PEQV-------IGINSHCDASALTILLPINQMDGLQIKKD-GKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFK 475 Y+ +K+L +IL+ A+ L + D + + ++ + LR+N+YPP + P ++ IG H D LTIL N + GLQI G + V P P F V +GD L+V TNG + S+ HR N+ K ++S F L+ + P ++T +P L++ Sbjct: 135 YIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSLLRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQILTILRS-NNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWLISPLSKMVTAHSPCLYR 307
BLAST of CX287487 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 47/174 (27.01%), Postives = 80/174 (45.98%), Query Frame = 2 Query: 8 YLSELKNLALKILDQMAKALRMDPNDMKELFGNGVQ*LRMNYYPPCPQPEQVIGINSHCDASALTILLPINQMDGLQIKK--DGKLVAVRPLPDAFIVNIGDILEVFTNGIYRSMEHRATVNSMKKKLSFATFYGAKLDGELGPAPSLITRETPTLFKRISVVDHFKRFFSRAT 523 Y ++ A ++ +A++L + P+ E + +R+ YP P +G+ H DA ALT++ N + GL+I ++V P P A I N+GDI+ + TN Y+S HR NS + + F +D + P P L + + DHF+ ++ T Sbjct: 222 YHDQMLAFANHVMSLLAESLELSPDAFDEFCSDPTTSIRLLRYPSSPNR---LGVQEHTDADALTLMSQDN-VKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRVCNNSGSDRYTIPFFLQGNIDYVVAPLPGLGPSTAEPIAVEDLLRDHFQNSYTSHT 391 The following BLAST results are available for this feature:
BLAST of CX287487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287487 ID=CX287487; Name=CX287487; organism=Citrus clementina; type=EST; length=557bpback to top |