CX287498

Overview
NameCX287498
Unique NameCX287498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length494
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 6.380e-33
Identity = 67/73 (91.78%), Postives = 72/73 (98.63%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            MKDTDSEEELKEAF+VFDKDQNG+ISAA+ RHVMTNLGEKLTDEEVDEMIREADVDGDGQ+NYEEFVK+MMAK
Sbjct:   77 MKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMMMAK 149          

HSP 2 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query:    1 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76          
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM_TRYCR (Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 1.856e-32
Identity = 67/73 (91.78%), Postives = 72/73 (98.63%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            M+D+DSEEE+KEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:   77 MQDSDSEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 2.424e-32
Identity = 66/73 (90.41%), Postives = 72/73 (98.63%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            M+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:   77 MQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 2.424e-32
Identity = 66/73 (90.41%), Postives = 72/73 (98.63%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            M+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:   77 MQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 2.424e-32
Identity = 67/73 (91.78%), Postives = 71/73 (97.26%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            M DTD+EEE+KEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:   77 MHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 3.166e-32
Identity = 66/73 (90.41%), Postives = 71/73 (97.26%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            MKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MMAK
Sbjct:   77 MKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMAK 149          
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM2_PETHY (Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 3.166e-32
Identity = 64/73 (87.67%), Postives = 73/73 (100.00%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            MKDTDSEEELKEAF+VFDKDQNG+ISAA++RHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:   77 MKDTDSEEELKEAFKVFDKDQNGYISAADVRHVMTNLGEKLTDEEVDEMIREADMDGDGQVNYEEFVRMMLAK 149          
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 4.135e-32
Identity = 65/73 (89.04%), Postives = 71/73 (97.26%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            MKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:   77 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 4.135e-32
Identity = 65/73 (89.04%), Postives = 71/73 (97.26%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            MKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +MM+K
Sbjct:   77 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMMSK 149          
BLAST of CX287498 vs. ExPASy Swiss-Prot
Match: CALM_SACJA (Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 5.401e-32
Identity = 65/73 (89.04%), Postives = 71/73 (97.26%), Query Frame = 1
Query:    1 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 219
            MKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   77 MKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
The following BLAST results are available for this feature:
BLAST of CX287498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
CALM_MOUSC6.380e-3391.78Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_TRYCR1.856e-3291.78Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2[more]
CALM_TRYBG2.424e-3290.41Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV... [more]
CALM_TRYBB2.424e-3290.41Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_EUGGR2.424e-3291.78Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM_MACPY3.166e-3290.41Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM2_PETHY3.166e-3287.67Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2[more]
CALM_METSE4.135e-3289.04Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_LUMRU4.135e-3289.04Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_SACJA5.401e-3289.04Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC01010B12SK Veg1 Citrus clementina cDNA clone C01010B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287498 ID=CX287498; Name=CX287498; organism=Citrus clementina; type=EST; length=494bp
ATGAAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTT
CGACAAGGATCAGAATGGTTTCATCTCAGCTGCTGAACTGCGTCATGTGA
TGACAAACCTTGGGGAGAAGCTTACTGATGAGGAAGTCGATGAGATGATA
AGGGAAGCTGATGTCGATGGTGATGGCCAGATAAATTATGAGGAATTTGT
CAAGGTTATGATGGCTAAGTAAGTGACTCCACCCAACCAAAACTTCCTGG
AAAAAGAAGAAATTGGTTGATTAATATAATTGGTTCCCTAGTTTCCTTTT
TTATAAATTTTAATTTGATAACTCTGAGGTCAAGCTAAAGGAAGCATGTT
GTCTCCTGCTTCAATTTGTCTTGTGACTGGAGCAACTTTTCAGTTTTTTA
ATGTTTTAGTTTTTTTCCGCTCTTCTGTGAACATTGTTTCTGTTAAATGA
GTGACTCGTTGATCTGCCTTATTTCTTAAAAAAAAAAAAAAAAA
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