CX287501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 6.718e-71 Identity = 126/173 (72.83%), Postives = 148/173 (85.55%), Query Frame = 2 Query: 2 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 MASS++SSA VAT R++ AQASMVAPFTGLKS+++FP ++KTN DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LS E LL EI YL+++GW+PCLEFE E G+VYREH SPGYYDGRYWTMWKLPM+GCTDATQV EV E +K YP + +RIIGFDN RQVQCIS Sbjct: 1 MASSIMSSAAVAT--RSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCIS 171
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS_MUSAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Musa acuminata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 8.774e-71 Identity = 127/173 (73.41%), Postives = 148/173 (85.55%), Query Frame = 2 Query: 2 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 ++S M+SSA AT RAS AQ+SMVAPFTGLKS+SAFP T+K N D++ + SNGGRVQCMKVWP G+KKFETLSYLP + DEAL+K+I YL+RS WIPCLEF KG+V+RE+HRSPGYYDGRYWTMWKLPM+GCTDA QV KEV E +KEYPH+F+RIIGFDN RQVQCIS Sbjct: 2 VSSMMVSSA--ATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEF-CPKGFVWRENHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCIS 171
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 8.774e-71 Identity = 121/173 (69.94%), Postives = 146/173 (84.39%), Query Frame = 2 Query: 2 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 MASS++S+A A + AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM+VWPP G+KKFETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN RQVQC+S Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSISAFPVTRK-NNDITSVASNGGRVQCMQVWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVS 172
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 1.955e-70 Identity = 124/171 (72.51%), Postives = 144/171 (84.21%), Query Frame = 2 Query: 8 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 +SMISS+ V T +RAS Q++ VAPF GLKS + FP KK N DITSI SNGGRV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFELEKG+VYREH++SPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV YP +FVRIIGFDN RQVQCIS Sbjct: 2 ASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCIS 171
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 2.553e-70 Identity = 124/171 (72.51%), Postives = 144/171 (84.21%), Query Frame = 2 Query: 8 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 +SMISS+ V T +RAS Q++ VAPF GLKS + FP KK N DITSI SNGGRV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFELEKG+VYREH++SPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV YP +FVRIIGFDN RQVQCIS Sbjct: 2 ASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCIS 171
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 3.334e-70 Identity = 121/173 (69.94%), Postives = 145/173 (83.82%), Query Frame = 2 Query: 2 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 MASS++S+A A + AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN RQVQCIS Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSVSAFPVTRK-NNDITSVASNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCIS 172
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 7.428e-70 Identity = 125/173 (72.25%), Postives = 145/173 (83.82%), Query Frame = 2 Query: 2 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 MASS++S+A A AS AQA+MVAPF GLKS ++FP T+K+N DITSIASNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ +GWIPC+EFELE +VYRE+HRSPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F+RIIGFDNKRQVQC+S Sbjct: 1 MASSLMSNAITAVVG-ASGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVS 171
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 7.428e-70 Identity = 126/175 (72.00%), Postives = 145/175 (82.86%), Query Frame = 2 Query: 2 MASSMISSATVATANRASL--AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 MASSM+S+A A A A+ AQA+MVAPF GLKS ++FP T+K+N DITSIASNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ GWIPC+EFELE +VYRE+HRSPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F+RIIGFDNKRQVQC+S Sbjct: 1 MASSMMSNAATAVAVAATSGGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQVQCVS 174
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS2_SPIOL (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 1.655e-69 Identity = 120/173 (69.36%), Postives = 147/173 (84.97%), Query Frame = 2 Query: 2 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 MASS++SSA VAT +R AQASMVAPFTGLKS+ FPATKK N+DITS+ASNGGRVQCMKVWP +K++ETLSYLPPL+ + L +++ YL+ + W+PCLEFE + G+VYREHH SPGYYDGRYWTMWKLPM+GCTD QVL E+ E +KEYP++F+RIIGFD+ RQVQC+S Sbjct: 1 MASSVLSSAAVATVSRTP-AQASMVAPFTGLKSTVGFPATKK-NDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVS 171
BLAST of CX287501 vs. ExPASy Swiss-Prot
Match: RBS_TRIRP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 2.161e-69 Identity = 121/170 (71.18%), Postives = 144/170 (84.71%), Query Frame = 2 Query: 11 SMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIS 520 ++ISSA V T NRA + QA++ PFTGLKSS+ FP TKK NNDITSI SNG RV CM+VWPP G KKFETLSYLPPL+DE LLKE+ YL+R GW+PC+EFELEKG+V+R+++ SPGYYDGRYWTMW+LP++G TDA QVLKEV E + EYP +F+RIIGFDN RQVQCIS Sbjct: 2 ALISSAAVTTINRAPV-QANLATPFTGLKSSAGFPVTKK-NNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCIS 169 The following BLAST results are available for this feature:
BLAST of CX287501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287501 ID=CX287501; Name=CX287501; organism=Citrus clementina; type=EST; length=522bpback to top |