CX287505

Overview
NameCX287505
Unique NameCX287505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length558
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig730 contig Ccv1_Contig730:755..1313. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.548e-26
Identity = 54/123 (43.90%), Postives = 81/123 (65.85%), Query Frame = -3
Query:  188 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 556
            R+A ++ ++ G+ +P   ++ VN WAIGRD   W +P  F+PERF+  ++D KG++FEL+PFG GRRICP + +   M+   L +L+  FDWKL +GV  + ID+EE  GLT+ K   L  +P
Sbjct:  371 REAMSEFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPGLTVNKKNELLLVP 493          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.022e-26
Identity = 55/123 (44.72%), Postives = 81/123 (65.85%), Query Frame = -3
Query:  188 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 556
            R+A A  ++ G+ +P   Q++VN +AIGRD  LW+NP  F PERF+   +D +G NFEL+PFG+GRRICPG+ + I  + L L +L+  FDW L +G T + ID+EE+  + + K   L  +P
Sbjct:  375 REAMAKIKIQGYDIPEKTQIMVNVYAIGRDPDLWENPEEFKPERFVDSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEGAIIIGKKVSLELVP 497          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.641e-26
Identity = 56/123 (45.53%), Postives = 80/123 (65.04%), Query Frame = -3
Query:  188 KASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDL-DVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 553
            + + DT + GF +P  ++V++N +AIGRD + W +P +F P RFL   + D KG NFE IPFG+GRR CPG+ L +  L L +  +++ F WKL DG+ P  +DM + FGLT  KA  L A+P
Sbjct:  390 ETAEDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVP 512          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.641e-26
Identity = 53/124 (42.74%), Postives = 81/124 (65.32%), Query Frame = -3
Query:  185 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALPI 556
            R+  ++ ++ G+ +    ++ VN WAIGRD  +W +P  F+PERF+  D+DVKG+++EL+PFG+GRRICP + + I  +   L +L+  FDWKL +GV  E I M+E  GLT  K   L  +P+
Sbjct:  375 REVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVEDIYMDEASGLTSHKKHDLLLVPV 498          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.449e-26
Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = -3
Query:  185 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLG---LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALPI 556
            R++S    V G+ +P   ++ VN WAIGRD + W+NP+ F PERF       LDV+G+++  IPFG+GRR CPG  LA++++++ L  +I  F WK ++G     +DMEEK G+TL +A P+  +P+
Sbjct:  369 RESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNG--NNKVDMEEKSGITLPRAHPIICVPV 493          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.449e-26
Identity = 54/123 (43.90%), Postives = 80/123 (65.04%), Query Frame = -3
Query:  188 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 556
            R+A ++ E+ G+ +P   ++ VN WAIGRD   W +P  F+PERF   ++D KG++FEL+PFG GRR+CP + +   M+   L +L+  FDWKL +G+  + IDMEE  GLT+ K   L  +P
Sbjct:  372 REAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFTDNNIDAKGQHFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWKLPEGMKVDDIDMEEAPGLTVNKKNELILVP 494          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.449e-26
Identity = 52/123 (42.28%), Postives = 80/123 (65.04%), Query Frame = -3
Query:  188 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 556
            R+  +D ++ G+ +P    + +NT++IGRD + W+NP  F PERF+   ++ KG+++EL+PFGAGRRICPG+   I ++ L L +++  FDW L DG+  E IDMEE     + K  PL  +P
Sbjct:  373 RETMSDLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFNPERFIDSPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDIDMEEAGAFVVAKKVPLELIP 495          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.504e-26
Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = -3
Query:  221 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLT 556
            R+   +TE+ G+ +P   +V+VN WA+GRD   WD+  SF PERF    +D  G NFE +PFG GRRICPG+   +  +YL L  L+  FDWKL  G+ P+ +D+ E  G+T
Sbjct:  373 RECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGIT 484          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.504e-26
Identity = 56/124 (45.16%), Postives = 79/124 (63.71%), Query Frame = -3
Query:  185 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALPI 556
            R+  AD ++ G+ +P    +LVN W+IGRD   W NP  F PERF+   +D KG +FEL+PFG+GRRICPG+ +AI  + L L +L+  FDW + +    + +DMEE   LT+ K  PL  LP+
Sbjct:  378 RETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPE--KKKDMDMEEAGDLTVDKKVPLELLPV 499          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.683e-26
Identity = 51/123 (41.46%), Postives = 77/123 (62.60%), Query Frame = -3
Query:  188 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 556
            R+    T + G+ +P   +V++NTWAIGRD   W +   F+PERF    +D KG +FE IPFGAGRR+CPG+   +  + L L  L+  F+W+L + + PE +DM+E FG+T+ +   L  +P
Sbjct:  376 RECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKLFLIP 498          
The following BLAST results are available for this feature:
BLAST of CX287505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
C71BW_ARATH1.548e-2643.90Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH2.022e-2644.72Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH2.641e-2645.53Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BA_ARATH2.641e-2642.74Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN3.449e-2642.52Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71BV_ARATH3.449e-2643.90Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH3.449e-2642.28Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71D7_SOLCH4.504e-2645.54Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71B4_ARATH4.504e-2645.16Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71D8_SOYBN7.683e-2641.46Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC01010C08SK Veg1 Citrus clementina cDNA clone C01010C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287505 ID=CX287505; Name=CX287505; organism=Citrus clementina; type=EST; length=558bp
AGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTAAAATTCTGAATTC
ACATTCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATAC
CGAGTAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAG
CACCAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTCTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGCTGAGGC
TTTACGGG
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