CX287512

Overview
NameCX287512
Unique NameCX287512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_ASPNG (Protein disulfide-isomerase OS=Aspergillus niger GN=pdiA PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.294e-18
Identity = 42/88 (47.73%), Postives = 51/88 (57.95%), Query Frame = 3 
Query:    3 GKVPPFXXXXXXXXXXXXXXXXXXADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVA----IAKFDATANDIP 254
            GKV P                   A S +D+V ++ K+VLLEFYAPWCGHCK LAP  DE+A  Y +  D+A    IAK DATAND+P
Sbjct:  342 GKVEPSIKSEPVPESQEGPVTVVVAHSYKDLVIDNDKDVLLEFYAPWCGHCKALAPKYDELAALYADHPDLAAKVTIAKIDATANDVP 429

HSP 2 Score: 31.187 bits (69), Expect = 6.294e-18
Identity = 14/35 (40.00%), Postives = 20/35 (57.14%), Query Frame = 1 
Query:  277 GYPTVFFRSASGKTVP--YEGDRTTEDIVDFIENN 375
            G+PT+    A  K  P  Y G RT ED+ +F++ N
Sbjct:  434 GFPTLRLYPAGAKDSPIEYSGSRTVEDLANFVKEN 468
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_DROME (Protein disulfide-isomerase OS=Drosophila melanogaster GN=Pdi PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.042e-17
Identity = 30/59 (50.85%), Postives = 46/59 (77.97%), Query Frame = 3 
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDI 251
            + + + +  +  K+VL+EFYAPWCGHCKQLAPI D++A  Y+++ D+ IAK D+TAN++
Sbjct:  374 SSNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEKYKDNEDIVIAKMDSTANEL 432

HSP 2 Score: 31.187 bits (69), Expect = 3.042e-17
Identity = 13/42 (30.95%), Postives = 24/42 (57.14%), Query Frame = 1 
Query:  265 LKSIGYPTV-FFRSASGKTVPYEGDRTTEDIVDFIENNRDTS 387
            +K   +PT+ +FR    K + +  DRT +D V F++ N + +
Sbjct:  435 IKISSFPTIKYFRKEDNKVIDFNLDRTLDDFVKFLDANGEVA 476
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA4_HUMAN (Protein disulfide-isomerase A4 OS=Homo sapiens GN=PDIA4 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 5.111e-17
Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:   81 SLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            +   +V +  K+VL+EFYAPWCGHCKQL P+ + +A  Y+    + IAK DATAND+P D ++V   P
Sbjct:  534 TFDSIVMDPKKDVLIEFYAPWCGHCKQLEPVYNSLAKKYKGQKGLVIAKMDATANDVPSDRYKVEGFP 601

HSP 2 Score: 27.335 bits (59), Expect = 5.111e-17
Identity = 13/36 (36.11%), Postives = 20/36 (55.56%), Query Frame = 1 
Query:  277 GYPTVFFRSASGKTVPYE---GDRTTEDIVDFIENN 375
            G+PT++F  +  K  P +   GDR  E +  FIE +
Sbjct:  599 GFPTIYFAPSGDKKNPVKFEGGDRDLEHLSKFIEEH 634
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA3_BOVIN (Protein disulfide-isomerase A3 OS=Bos taurus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.129e-16
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 3 
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            A++  ++V N  K+VL+EFYAPWCGHCK L P   E+    + D ++ IAK DATAND+P   +EV   P
Sbjct:  383 AENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIVIAKMDATANDVP-SPYEVRGFP 451

HSP 2 Score: 30.4166 bits (67), Expect = 1.129e-16
Identity = 13/39 (33.33%), Postives = 23/39 (58.97%), Query Frame = 1 
Query:  259 TPLKSIGYPTVFFRSASGKTVP--YEGDRTTEDIVDFIE 369
            +P +  G+PT++F  A+ K  P  YEG R   D + +++
Sbjct:  443 SPYEVRGFPTIYFSPANKKQNPKKYEGGRELSDFISYLK 481
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA3_PONAB (Protein disulfide-isomerase A3 OS=Pongo abelii GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.129e-16
Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 3 
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            A++  ++V N  K+VL+EFYAPWCGHCK L P   E+      D ++ IAK DATAND+P   +EV   P
Sbjct:  383 AENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVP-SPYEVRGFP 451

HSP 2 Score: 30.8018 bits (68), Expect = 1.129e-16
Identity = 13/39 (33.33%), Postives = 23/39 (58.97%), Query Frame = 1 
Query:  259 TPLKSIGYPTVFFRSASGKTVP--YEGDRTTEDIVDFIE 369
            +P +  G+PT++F  A+ K  P  YEG R   D + +++
Sbjct:  443 SPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQ 481
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA3_HUMAN (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 1.129e-16
Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 3 
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            A++  ++V N  K+VL+EFYAPWCGHCK L P   E+      D ++ IAK DATAND+P   +EV   P
Sbjct:  383 AENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVP-SPYEVRGFP 451

HSP 2 Score: 30.8018 bits (68), Expect = 1.129e-16
Identity = 13/39 (33.33%), Postives = 23/39 (58.97%), Query Frame = 1 
Query:  259 TPLKSIGYPTVFFRSASGKTVP--YEGDRTTEDIVDFIE 369
            +P +  G+PT++F  A+ K  P  YEG R   D + +++
Sbjct:  443 SPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQ 481
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA3_CERAE (Protein disulfide-isomerase A3 OS=Cercopithecus aethiops GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.129e-16
Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 3 
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            A++  ++V N  K+VL+EFYAPWCGHCK L P   E+      D ++ IAK DATAND+P   +EV   P
Sbjct:  383 AENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVP-SPYEVRGFP 451

HSP 2 Score: 30.8018 bits (68), Expect = 1.129e-16
Identity = 13/39 (33.33%), Postives = 23/39 (58.97%), Query Frame = 1 
Query:  259 TPLKSIGYPTVFFRSASGKTVP--YEGDRTTEDIVDFIE 369
            +P +  G+PT++F  A+ K  P  YEG R   D + +++
Sbjct:  443 SPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQ 481
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA3_RAT (Protein disulfide-isomerase A3 OS=Rattus norvegicus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.129e-16
Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 3 
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            A+S  D+V    K+VL+EFYAPWCGHCK L P   E+      D ++ IAK DATAND+P   +EV   P
Sbjct:  383 AESFDDIVNAEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVP-SPYEVKGFP 451

HSP 2 Score: 31.9574 bits (71), Expect = 1.129e-16
Identity = 13/39 (33.33%), Postives = 23/39 (58.97%), Query Frame = 1 
Query:  259 TPLKSIGYPTVFFRSASGKTVP--YEGDRTTEDIVDFIE 369
            +P +  G+PT++F  A+ K  P  YEG R   D + +++
Sbjct:  443 SPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFISYLQ 481
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA3_MOUSE (Protein disulfide-isomerase A3 OS=Mus musculus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.467e-16
Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 3 
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            A++  D+V    K+VL+EFYAPWCGHCK L P   E+      D ++ IAK DATAND+P   +EV   P
Sbjct:  383 AENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVP-SPYEVKGFP 451

HSP 2 Score: 31.9574 bits (71), Expect = 1.467e-16
Identity = 13/39 (33.33%), Postives = 23/39 (58.97%), Query Frame = 1 
Query:  259 TPLKSIGYPTVFFRSASGKTVP--YEGDRTTEDIVDFIE 369
            +P +  G+PT++F  A+ K  P  YEG R   D + +++
Sbjct:  443 SPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFISYLQ 481
[Close]
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI2_CAEEL (Protein disulfide-isomerase 2 OS=Caenorhabditis elegans GN=pdi-2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.189e-16
Identity = 27/57 (47.37%), Postives = 41/57 (71.93%), Query Frame = 3 
Query:   81 SLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDI 251
            + + +  ++ KNVL+EFYAPWCGHCKQLAP  D++   + +D  + IAK D+T N++
Sbjct:  372 NFEQVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEV 428

HSP 2 Score: 35.8094 bits (81), Expect = 4.189e-16
Identity = 18/41 (43.90%), Postives = 23/41 (56.10%), Query Frame = 1 
Query:  256 VTPLKSIGYPTV-FFRSASGKTVPYEGDRTTEDIVDFIENN 375
            V  +K   +PT+ FF + S K V Y GDRT E    F+E N
Sbjct:  428 VEDVKIQSFPTIKFFPAGSNKVVDYTGDRTIEGFTKFLETN 468
The following BLAST results are available for this feature:
BLAST of CX287512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
PDI_ASPNG6.294e-1847.73Protein disulfide-isomerase OS=Aspergillus niger G... [more]
PDI_DROME3.042e-1750.85Protein disulfide-isomerase OS=Drosophila melanoga... [more]
PDIA4_HUMAN5.111e-1748.53Protein disulfide-isomerase A4 OS=Homo sapiens GN=... [more]
PDIA3_BOVIN1.129e-1648.57Protein disulfide-isomerase A3 OS=Bos taurus GN=PD... [more]
PDIA3_PONAB1.129e-1648.57Protein disulfide-isomerase A3 OS=Pongo abelii GN=... [more]
PDIA3_HUMAN1.129e-1648.57Protein disulfide-isomerase A3 OS=Homo sapiens GN=... [more]
PDIA3_CERAE1.129e-1648.57Protein disulfide-isomerase A3 OS=Cercopithecus ae... [more]
PDIA3_RAT1.129e-1650.00Protein disulfide-isomerase A3 OS=Rattus norvegicu... [more]
PDIA3_MOUSE1.467e-1648.57Protein disulfide-isomerase A3 OS=Mus musculus GN=... [more]
PDI2_CAEEL4.189e-1647.37Protein disulfide-isomerase 2 OS=Caenorhabditis el... [more]

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Properties
Property NameValue
Genbank descriptionC01010D03SK Veg1 Citrus clementina cDNA clone C01010D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287512 ID=CX287512; Name=CX287512; organism=Citrus clementina; type=EST; length=433bp
AAGGCAAGGTTCCCCCATTCAAAAAGTCTGAGCCTATCCCTGAAGAGAAC
AACGAGCCTGTGAAAGTGGTTGTTGCTGACAGCCTTCAGGACATGGTTTT
CAACTCTGGAAAAAATGTTTTGCTCGAGTTTTACGCTCCTTGGTGTGGAC
ACTGCAAACAGTTGGCTCCGATCTTGGATGAAGTTGCTGTCTCATATCAA
AATGATGCTGATGTTGCTATTGCAAAATTTGATGCAACCGCAAATGATAT
TCCTGGTGACACCTTTGAAGTCCATAGGTTACCCAACCGTGTTCTTCCGA
TCTGCTAGTGGAAAGACAGTGCCCTATGAGGGGGATAGGACCACAGAAGA
TATTGTTGACTTCATTGAAAATAACAGGGACACAAGCTGCCCCCAACGAA
ACTGTAAAAGAGGAATCTGGAAAAGATGAGCTC
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