CX287512

Overview
NameCX287512
Unique NameCX287512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA1_CHICK (Protein disulfide-isomerase OS=Gallus gallus GN=P4HB PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 1.199e-14
Identity = 31/68 (45.59%), Postives = 50/68 (73.53%), Query Frame = 3
Query:   81 SLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            + +++ F+  KNV +EFYAPWCGHCKQLAPI D++  +Y++  ++ IAK D+TAN++  +  ++H  P
Sbjct:  381 NFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYRDHENIVIAKMDSTANEV--EAVKIHSFP 446          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA1_RAT (Protein disulfide-isomerase OS=Rattus norvegicus GN=P4hb PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.566e-14
Identity = 32/68 (47.06%), Postives = 50/68 (73.53%), Query Frame = 3
Query:   81 SLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            + +++ F+  KNV +EFYAPWCGHCKQLAPI D++  +Y++  ++ IAK D+TAN++  +  +VH  P
Sbjct:  378 NFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFP 443          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA1_BOVIN (Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.566e-14
Identity = 32/68 (47.06%), Postives = 50/68 (73.53%), Query Frame = 3
Query:   81 SLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            + +++ F+  KNV +EFYAPWCGHCKQLAPI D++  +Y++  ++ IAK D+TAN++  +  +VH  P
Sbjct:  378 NFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFP 443          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: GSBP_CHICK (Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Gallus gallus PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.566e-14
Identity = 31/66 (46.97%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   87 QDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            +++ F+  KNV +EFYAPWCGHCKQLAP+ D +  +Y++D ++ IAK ++TAN++  +  +VH  P
Sbjct:  379 EEVAFDEKKNVFIEFYAPWCGHCKQLAPMWDRLGEAYKDDENIVIAKMESTANEV--EAIKVHSFP 442          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA1_MOUSE (Protein disulfide-isomerase OS=Mus musculus GN=P4hb PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.045e-14
Identity = 32/68 (47.06%), Postives = 50/68 (73.53%), Query Frame = 3
Query:   81 SLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            + +++ F+  KNV +EFYAPWCGHCKQLAPI D++  +Y++  ++ IAK D+TAN++  +  +VH  P
Sbjct:  378 NFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFP 443          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA1_CRIGR (Protein disulfide-isomerase OS=Cricetulus griseus GN=P4HB PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.045e-14
Identity = 32/68 (47.06%), Postives = 50/68 (73.53%), Query Frame = 3
Query:   81 SLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            + +++ F+  KNV +EFYAPWCGHCKQLAPI D++  +Y++  ++ IAK D+TAN++  +  +VH  P
Sbjct:  378 NFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFP 443          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: BS2_TRYBB (Bloodstream-specific protein 2 OS=Trypanosoma brucei brucei GN=BS2 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.131e-14
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 3
Query:  105 SGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            SGK++L+ F+APWCGHCK  AP  D++A  + +  D+ +A+ DATAN +   TF V   P
Sbjct:  365 SGKDMLILFFAPWCGHCKNFAPTFDKIAKEF-DATDLIVAELDATANYVNSSTFTVTAFP 423          

HSP 2 Score: 34.6538 bits (78), Expect = 2.131e-14
Identity = 14/35 (40.00%), Postives = 23/35 (65.71%), Query Frame = 1
Query:  280 YPTVFFRSASGKTVPYEGDRTTEDIVDFIENNRDT 384
            +PTVFF    GK V +EG+R+ E++ +F+  +  T
Sbjct:  422 FPTVFFVPNGGKPVVFEGERSFENVYEFVRKHVTT 456          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA2_PONAB (Protein disulfide-isomerase A2 OS=Pongo abelii GN=PDIA2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 3
Query:   81 SLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            + + + F+  KNV ++FYAPWC HCK++AP  + +A  YQ+  DV IA+ DATAN++  D F VH  P
Sbjct:  397 NFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDVIIAELDATANEL--DAFAVHGFP 462          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDIA2_HUMAN (Protein disulfide-isomerase A2 OS=Homo sapiens GN=PDIA2 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 5.038e-13
Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 3
Query:   81 SLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            + + + F+  KNV ++FYAPWC HCK++AP  + +A  YQ+  D+ IA+ DATAN++  D F VH  P
Sbjct:  397 NFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDIIIAELDATANEL--DAFAVHGFP 462          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 8.283e-13
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 3
Query:   90 DMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQN-DADVAIAKFDATANDIPGDTFE 269
            ++V +  K+VL+ +YAPWCGHCK+LAP   E+A +Y N  +DV IAK D T ND+ G   E
Sbjct:  388 EIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVVIE 448          

HSP 2 Score: 28.8758 bits (63), Expect = 8.283e-13
Identity = 13/35 (37.14%), Postives = 20/35 (57.14%), Query Frame = 1
Query:  277 GYPTVFFRSASGKT--VPYEGDRTTEDIVDFIENN 375
            GYPT+       K+  V Y+G R+ + + DFI+ N
Sbjct:  449 GYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKEN 483          
The following BLAST results are available for this feature:
BLAST of CX287512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
PDIA1_CHICK1.199e-1445.59Protein disulfide-isomerase OS=Gallus gallus GN=P4... [more]
PDIA1_RAT1.566e-1447.06Protein disulfide-isomerase OS=Rattus norvegicus G... [more]
PDIA1_BOVIN1.566e-1447.06Protein disulfide-isomerase OS=Bos taurus GN=P4HB ... [more]
GSBP_CHICK1.566e-1446.97Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
PDIA1_MOUSE2.045e-1447.06Protein disulfide-isomerase OS=Mus musculus GN=P4h... [more]
PDIA1_CRIGR2.045e-1447.06Protein disulfide-isomerase OS=Cricetulus griseus ... [more]
BS2_TRYBB2.131e-1446.67Bloodstream-specific protein 2 OS=Trypanosoma bruc... [more]
PDIA2_PONAB3.857e-1347.06Protein disulfide-isomerase A2 OS=Pongo abelii GN=... [more]
PDIA2_HUMAN5.038e-1345.59Protein disulfide-isomerase A2 OS=Homo sapiens GN=... [more]
PDI_YEAST8.283e-1350.82Protein disulfide-isomerase OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionC01010D03SK Veg1 Citrus clementina cDNA clone C01010D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287512 ID=CX287512; Name=CX287512; organism=Citrus clementina; type=EST; length=433bp
AAGGCAAGGTTCCCCCATTCAAAAAGTCTGAGCCTATCCCTGAAGAGAAC
AACGAGCCTGTGAAAGTGGTTGTTGCTGACAGCCTTCAGGACATGGTTTT
CAACTCTGGAAAAAATGTTTTGCTCGAGTTTTACGCTCCTTGGTGTGGAC
ACTGCAAACAGTTGGCTCCGATCTTGGATGAAGTTGCTGTCTCATATCAA
AATGATGCTGATGTTGCTATTGCAAAATTTGATGCAACCGCAAATGATAT
TCCTGGTGACACCTTTGAAGTCCATAGGTTACCCAACCGTGTTCTTCCGA
TCTGCTAGTGGAAAGACAGTGCCCTATGAGGGGGATAGGACCACAGAAGA
TATTGTTGACTTCATTGAAAATAACAGGGACACAAGCTGCCCCCAACGAA
ACTGTAAAAGAGGAATCTGGAAAAGATGAGCTC
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