CX287535

Overview
NameCX287535
Unique NameCX287535
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length422
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287535 vs. ExPASy Swiss-Prot
Match: RL29_SCHPO (60S ribosomal protein L29 OS=Schizosaccharomyces pombe GN=rpl29 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 3 
Query:   45 MAKSKNHTAHNQSYKAHKNGIKKPKKHRHTSTKGMDPKFLRNQRYARK 188
            MAKSKNHT HNQ+ KAH+NGIK+P+KHR+ S K  D KF RNQ++A +
Sbjct:    1 MAKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFANR 48
The following BLAST results are available for this feature:
BLAST of CX287535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
RL29_SCHPO2.303e-1264.5860S ribosomal protein L29 OS=Schizosaccharomyces p... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01010F04SK Veg1 Citrus clementina cDNA clone C01010F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287535 ID=CX287535; Name=CX287535; organism=Citrus clementina; type=EST; length=422bp
AATCTCTAGCACAGCCGCGAGCAGGGTCTTTTCCTGAAAACGAGATGGCA
AAGTCAAAGAATCACACAGCGCATAACCAGTCTTACAAGGCTCACAAGAA
CGGTATCAAGAAACCTAAGAAGCACCGCCACACTTCCACCAAAGGGATGG
ACCCAAAGTTCCTGAGGAACCAGAGGTATGCAAGGAAGCATAACAAGCAG
GGAGGTGAATCTGCTGCCGAGGAGTAGATGCTGTTATGGGGTTTTAATTA
CTTAGTTGTTAAGATTTTTTTAACCCCTTGAATGGATATCTGTTTTGTTT
TTGTTATTGTAGTGACTTGATGGCACTCTAGTGGGTTTCATTTCAATTTC
AAGTATCTGCTGAATTGTTAAAAAAAAAAAAAAAAAACTCGAGTCGGCAC
GAGGCATCGAAGTACTCTCACT
back to top