CX287606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPE2_HUMAN (Serine/threonine-protein phosphatase with EF-hands 2 OS=Homo sapiens GN=PPEF2 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13 Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 287 LCEKAKEILMDESNVQPVKS----PVTICGDIHGQFHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592 L + K+ L+ N+ V + +T+CGD+HGQ DL +F G P+ +Y+F GD+VDRG SVE + +L + + YP+ + RGNHE + YGF E Sbjct: 149 LLYETKKHLVQLPNINRVSTCYSEEITVCGDLHGQLDDLIFIFYKNGLPSPERSYVFNGDFVDRGKDSVEILMILFAFMLVYPKEFHLNRGNHEDHMVNLRYGFTKE 255
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: RDGC_DROME (Serine/threonine-protein phosphatase rdgC OS=Drosophila melanogaster GN=rdgC PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.993e-13 Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 263 LSEQEVRVLCEKAKEILMDESNVQPVKSPV----TICGDIHGQFHDLAELFRIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592 L + V ++ +A + L N+ PV + V T+CGD+HG+ DL + G +N Y+F GD+VDRG +E + LL+SL + +P + + RGNHE + YGF E Sbjct: 120 LHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIRE 234
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPE2_MOUSE (Serine/threonine-protein phosphatase with EF-hands 2 OS=Mus musculus GN=Ppef2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.453e-12 Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 2 Query: 350 VTICGDIHGQFHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592 VT+CGD+HGQ DL +F G P+ Y+F GD+VDRG SVE + +L + + YP+ + RGNHE + YGF E Sbjct: 174 VTVCGDLHGQLDDLIFIFYKNGLPSPERAYVFNGDFVDRGKDSVEVLMVLFAFMLVYPKEFHLNRGNHEDHLVNLRYGFTKE 255
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPE1_MOUSE (Serine/threonine-protein phosphatase with EF-hands 1 OS=Mus musculus GN=Ppef1 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.230e-11 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 2 Query: 296 KAKEILMDESNVQPVKS----PVTICGDIHGQFHDLAELFRIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592 +A+++L N VK+ +TICGD+HG+ DL +F G + N Y+F GD+VDRG S+E + +L+ + YP + + RGNHE + YGF E Sbjct: 148 EARKVLKQMPNFSHVKTFPAKEITICGDLHGKLDDLMLIFYKNGLPSENNPYVFNGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKE 251 The following BLAST results are available for this feature:
BLAST of CX287606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287606 ID=CX287606; Name=CX287606; organism=Citrus clementina; type=EST; length=592bpback to top |