CX287606

Overview
NameCX287606
Unique NameCX287606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AA_DICDI (Serine/threonine-protein phosphatase 2A catalytic subunit A OS=Dictyostelium discoideum GN=pho2A PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.038e-55
Identity = 100/124 (80.65%), Postives = 112/124 (90.32%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            ++D+ I+ L +CKPLSE EVR LCEKA+EIL  ESNVQPV+ PVT+CGDIHGQFHDL ELF+IGG CPDTNYLFMGDYVDRG+YSVETVTLLV+LKVRY  R+TILRGNHESRQITQVYGFYDE
Sbjct:    6 DVDKYISILKECKPLSESEVRDLCEKAREILSKESNVQPVRCPVTVCGDIHGQFHDLMELFKIGGNCPDTNYLFMGDYVDRGFYSVETVTLLVALKVRYKDRVTILRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSJ (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.038e-55
Identity = 103/127 (81.10%), Postives = 112/127 (88.19%), Query Frame = 2
Query:  212 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            SH +LD QI+QL +CK L E EVR LCE+AK ILM+E NVQPV+ PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY  RITILRGNHESRQITQVYGFYDE
Sbjct:    3 SHADLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSI (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.038e-55
Identity = 103/127 (81.10%), Postives = 112/127 (88.19%), Query Frame = 2
Query:  212 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            SH +LD QI+QL +CK L E EVR LCE+AK ILM+E NVQPV+ PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY  RITILRGNHESRQITQVYGFYDE
Sbjct:    3 SHADLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A1_ARATH (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.038e-55
Identity = 99/126 (78.57%), Postives = 114/126 (90.48%), Query Frame = 2
Query:  215 HGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +G+LD QI QLM+CKPL E +V++LC++AK IL++E NVQPVK PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETV+LLV+LKVRY  R+TILRGNHESRQITQVYGFYDE
Sbjct:    4 NGDLDRQIEQLMECKPLGEADVKILCDQAKAILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A1_EMENI (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Emericella nidulans GN=pphA PE=3 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.534e-54
Identity = 100/123 (81.30%), Postives = 110/123 (89.43%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD  I  LM CK L+E++VR LC++A+E+L +ESNVQPVK PVT+CGDIHGQFHDL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLV LK+RYPQRITILRGNHESRQITQVYGFYDE
Sbjct:   30 LDGWIESLMTCKQLAEEDVRRLCDRAREVLQEESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYYSVETVTLLVCLKIRYPQRITILRGNHESRQITQVYGFYDE 152          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A_HEVBR (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Hevea brasiliensis GN=PP2A PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.004e-54
Identity = 100/127 (78.74%), Postives = 111/127 (87.40%), Query Frame = 2
Query:  212 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            SHG+LD QI  LM+CKPL E   + LC++A+ IL++E NVQPVK PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY  RITILRGNHESRQITQVYGFYDE
Sbjct:    3 SHGDLDRQIEHLMECKPLPEARGQTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A5_ARATH (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Arabidopsis thaliana GN=PP2A5 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.004e-54
Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 2
Query:  218 GNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            G++D QI QLM+CK LSE EV++LCE AK IL++E NVQPVK PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETV+LLV+LKVRY  R+TILRGNHESRQITQVYGFYDE
Sbjct:    6 GDIDRQIEQLMECKALSETEVKMLCEHAKTILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSSPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDE 130          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A_ACECL (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Acetabularia cliftonii PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.418e-54
Identity = 99/123 (80.49%), Postives = 108/123 (87.80%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LDE I  LMQCKPL E+ V+ L  KA+E+  +E NVQPVK PVT+CGDIHGQFHD+ ELF+IGG CPDTNYLFMGDYVDRGY SVETVTLLVSLKVRYP+RITILRGNHESRQITQVYGFYDE
Sbjct:    7 LDEWIEHLMQCKPLPEENVKELVAKAREVFSNEKNVQPVKMPVTVCGDIHGQFHDMVELFKIGGTCPDTNYLFMGDYVDRGYNSVETVTLLVSLKVRYPERITILRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AA_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp2ca PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.418e-54
Identity = 101/123 (82.11%), Postives = 110/123 (89.43%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ I QL +CK LSE +V+ LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AA_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Oryctolagus cuniculus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.418e-54
Identity = 101/123 (82.11%), Postives = 110/123 (89.43%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ I QL +CK LSE +V+ LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDE 132          
The following BLAST results are available for this feature:
BLAST of CX287606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PP2AA_DICDI4.038e-5580.65Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A1_ORYSJ4.038e-5581.10Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_ORYSI4.038e-5581.10Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_ARATH4.038e-5578.57Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_EMENI1.534e-5481.30Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A_HEVBR2.004e-5478.74Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A5_ARATH2.004e-5480.00Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A_ACECL3.418e-5480.49Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2AA_RAT3.418e-5482.11Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RABIT3.418e-5482.11Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionC01011D05SK Veg1 Citrus clementina cDNA clone C01011D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287606 ID=CX287606; Name=CX287606; organism=Citrus clementina; type=EST; length=592bp
AATCACTGAAGCCTTCTCTCTTTTTTTTTTAAAATTTTTTTTGTTGAGAT
ACAAAATTGAATTTTGATTATAGGGTTTCGAAAAAATTAGGGTTTGTTTG
TTGAAATTTAGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCT
GAGTCTGCAAATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGG
TCCCTTCAAATTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATG
CAGTGCAAGCCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGC
CAAGGAGATATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTG
TTACAATTTGTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTT
TTCCGCATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGA
TTATGTTGACCGTGGTTACTATTCAGTAGAAACTGTTACGCTATTGGTAT
CTCTGAAAGTGCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCAT
GAAAGTCGTCAGATTACTCAGGTCTATGGATTCTATGATGAG
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