CX287606

Overview
NameCX287606
Unique NameCX287606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AA_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Sus scrofa GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.418e-54
Identity = 101/123 (82.11%), Postives = 110/123 (89.43%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ I QL +CK LSE +V+ LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AA_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus GN=Ppp2ca PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.418e-54
Identity = 101/123 (82.11%), Postives = 110/123 (89.43%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ I QL +CK LSE +V+ LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AA_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Homo sapiens GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.418e-54
Identity = 101/123 (82.11%), Postives = 110/123 (89.43%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ I QL +CK LSE +V+ LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AA_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Bos taurus GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.418e-54
Identity = 101/123 (82.11%), Postives = 110/123 (89.43%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ I QL +CK LSE +V+ LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A_DROME (Serine/threonine-protein phosphatase PP2A OS=Drosophila melanogaster GN=mts PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.615e-54
Identity = 100/124 (80.65%), Postives = 110/124 (88.71%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD+ I QL +C  L+E +VR LC+KAKEIL  ESNVQ VK PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGFYDE
Sbjct:    9 DLDQWIEQLNECNQLTETQVRTLCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A2_ERYGR (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Erysiphe graminis subsp. hordei GN=PP2A-2 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.299e-53
Identity = 102/127 (80.31%), Postives = 108/127 (85.04%), Query Frame = 2
Query:  212 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            S   LD  I  LM CK L E +V  LCEKA+E+L  ESNVQPVK PVT+CGDIHGQFHDL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLV+LK+RYPQRITILRGNHESRQITQVYGFYDE
Sbjct:   25 SISTLDGWIENLMACKQLPEVDVLRLCEKAREVLHSESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYYSVETVTLLVALKIRYPQRITILRGNHESRQITQVYGFYDE 151          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A_HELAN (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.216e-53
Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 2
Query:  212 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            S  +LD QI  LM CKPL E EVR LC++A+ IL++E NVQPVK PVT+CGDIHGQFHDL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY  RITILRGNHESRQITQVYGF+DE
Sbjct:    3 SQSDLDRQIEHLMDCKPLPE-EVRTLCDQARTILVEEWNVQPVKCPVTVCGDIHGQFHDLLELFRIGGSAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFFDE 128          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.216e-53
Identity = 98/116 (84.48%), Postives = 106/116 (91.38%), Query Frame = 2
Query:  245 LMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            L +CK L+E +VR LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYP+RITILRGNHESRQITQVYGFYDE
Sbjct:    1 LNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDE 116          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A2_SCHPO (Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa2 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.436e-52
Identity = 93/125 (74.40%), Postives = 112/125 (89.60%), Query Frame = 2
Query:  218 GNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            G++D  I QL +C+PLSE +V +LC+KA+E+L  E+NVQPV++PVT+CGDIHGQFHDL ELF+IGG  PD NYLFMGDYVDRGY+SVETV+LLV++K+RYP RITILRGNHESRQITQVYGFYDE
Sbjct:   21 GDVDRWIEQLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDE 145          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPX1_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 1 OS=Arabidopsis thaliana GN=PPX1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.708e-51
Identity = 92/124 (74.19%), Postives = 109/124 (87.90%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+PLSE EV+ LC KA EIL++ESNVQ V +PVT+CGDIHGQF+D+ ELF++GG CP TNYLFMGD+VDRGYYSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    3 DLDRQIGQLKRCEPLSESEVKALCLKAMEILVEESNVQRVDAPVTLCGDIHGQFYDMMELFKVGGDCPKTNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 126          
The following BLAST results are available for this feature:
BLAST of CX287606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PP2AA_PIG3.418e-5482.11Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_MOUSE3.418e-5482.11Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_HUMAN3.418e-5482.11Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_BOVIN3.418e-5482.11Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A_DROME7.615e-5480.65Serine/threonine-protein phosphatase PP2A OS=Droso... [more]
PP2A2_ERYGR1.299e-5380.31Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A_HELAN2.216e-5379.53Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2AB_PIG2.216e-5384.48Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A2_SCHPO1.436e-5274.40Major serine/threonine-protein phosphatase PP2A-2 ... [more]
PPX1_ARATH2.708e-5174.19Serine/threonine-protein phosphatase PP-X isozyme ... [more]

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Properties
Property NameValue
Genbank descriptionC01011D05SK Veg1 Citrus clementina cDNA clone C01011D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287606 ID=CX287606; Name=CX287606; organism=Citrus clementina; type=EST; length=592bp
AATCACTGAAGCCTTCTCTCTTTTTTTTTTAAAATTTTTTTTGTTGAGAT
ACAAAATTGAATTTTGATTATAGGGTTTCGAAAAAATTAGGGTTTGTTTG
TTGAAATTTAGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCT
GAGTCTGCAAATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGG
TCCCTTCAAATTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATG
CAGTGCAAGCCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGC
CAAGGAGATATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTG
TTACAATTTGTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTT
TTCCGCATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGA
TTATGTTGACCGTGGTTACTATTCAGTAGAAACTGTTACGCTATTGGTAT
CTCTGAAAGTGCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCAT
GAAAGTCGTCAGATTACTCAGGTCTATGGATTCTATGATGAG
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