CX287606

Overview
NameCX287606
Unique NameCX287606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: FYPP3_ARATH (Phytochrome-associated serine/threonine protein phosphatase 3 OS=Arabidopsis thaliana GN=FYPP3 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.221e-45
Identity = 83/124 (66.94%), Postives = 104/124 (83.87%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD+ I+++   + LSE E+++LCE  KEIL++ESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  PDTNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDE
Sbjct:    2 DLDQWISKVKDGQHLSEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPDTNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDE 125          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPP6_HUMAN (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Homo sapiens GN=PPP6C PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.102e-44
Identity = 80/124 (64.52%), Postives = 103/124 (83.06%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD+ +     CK L E +++ LC+   ++L++ESNVQPV +PVT+CGDIHGQF+DL ELFR GG+ PDTNY+FMGD+VDRGYYS+ET T L++LK ++P RIT+LRGNHESRQITQVYGFYDE
Sbjct:    5 DLDKYVEIARLCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDE 128          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: FYPP1_ARATH (Phytochrome-associated serine/threonine protein phosphatase 1 OS=Arabidopsis thaliana GN=FYPP1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.455e-44
Identity = 81/124 (65.32%), Postives = 104/124 (83.87%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD+ I+++   + LSE E+++LCE  KEIL++ESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK R+P  IT+LRGNHESRQ+TQVYGFYDE
Sbjct:    2 DLDQWISKVKDGQHLSEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARHPANITLLRGNHESRQLTQVYGFYDE 125          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: FYPP_PEA (Phytochrome-associated serine/threonine protein phosphatase OS=Pisum sativum GN=FYPP PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.207e-44
Identity = 81/124 (65.32%), Postives = 103/124 (83.06%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD+ I+++   + L E E+++LCE  KEIL++ESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDE
Sbjct:    2 DLDQWISKVKDGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDE 125          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPP6_DROME (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Drosophila melanogaster GN=PpV PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.188e-44
Identity = 78/125 (62.40%), Postives = 104/125 (83.20%), Query Frame = 2
Query:  218 GNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            G++D+ I  + +CK L E E++ LCE   +IL++E+N+ PV +PVT+CGDIHGQF+DL +LFR GG+ P TNY+FMGD+VDRGYYS+ET T L++LK RYP RIT+LRGNHE+RQIT+VYGF+DE
Sbjct:    2 GDVDKWIEDVKKCKYLPENELKKLCEMVCDILLEETNILPVSTPVTVCGDIHGQFYDLEQLFRTGGQVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDE 126          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPX1_PARTE (Serine/threonine-protein phosphatase PP-X homolog 1 OS=Paramecium tetraurelia GN=Ppx1 PE=3 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.079e-43
Identity = 81/124 (65.32%), Postives = 103/124 (83.06%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            ++D+ I  L   + L E +V++LC KAK+IL +E NV  V++PVTICGDIHGQF+DL ELF++GG  P+TNYLF+GD+VDRGY SVET  LL++LKVRYP +IT++RGNHESRQITQVYGFYDE
Sbjct:    3 DIDQWIETLKNGENLKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFYDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDE 126          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPX2_PARTE (Serine/threonine-protein phosphatase PP-X homolog 2 OS=Paramecium tetraurelia GN=Ppx2 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.545e-43
Identity = 81/124 (65.32%), Postives = 102/124 (82.26%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            ++D+ I  L   + L E +V++LC KAK+IL +E NV  V++PVTICGDIHGQF DL ELF++GG  P+TNYLF+GD+VDRGY SVET  LL++LKVRYP +IT++RGNHESRQITQVYGFYDE
Sbjct:    3 DIDQWIETLKNGENLKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFQDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDE 126          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: YOU5_SCHPO (Putative serine/threonine-protein phosphatase C26H8.05c OS=Schizosaccharomyces pombe GN=SPBC26H8.05c PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.048e-43
Identity = 78/124 (62.90%), Postives = 101/124 (81.45%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD Q+ +L   + + E  V  LC++ ++IL++ESN+Q + SPVTICGDIHGQ HDL ELFRIGG CP T YLF+GD+VDRG+YSVET  LL++LK +YP+ +T++RGNHESRQITQVYGFYDE
Sbjct:    5 DLDWQLEELENGRLIPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLFLGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDE 128          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: YD44_SCHPO (Putative serine/threonine-protein phosphatase C22H10.04 OS=Schizosaccharomyces pombe GN=SPAC22H10.04 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.347e-42
Identity = 79/124 (63.71%), Postives = 99/124 (79.84%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD  I +L + + ++E  +  LC  AKE+LM ESNV  + +P+T+ GDIHGQF DL E+FRIGG CP TNYLF+GDYVDRGYYS+ET+TLL+ LK+RYP+RIT+LRGNHESR ITQ YGFY E
Sbjct:    3 DLDNIIERLYEKQLIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIHGQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYGFYSE 126          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A4_YEAST (Serine/threonine-protein phosphatase PP2A-like PPG1 OS=Saccharomyces cerevisiae GN=PPG1 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 4.334e-41
Identity = 79/123 (64.23%), Postives = 98/123 (79.67%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LDE + +L + + L E  VR LC K KE+L+ ESNV  +++PVT+ GD+HGQFHD+ E+F+IGG  PDTNYLF+GDYVDRG YSVET+ LL+ LK+RYP RI +LRGNHESRQITQ YGFY E
Sbjct:    3 LDECLERLYKAQLLPEVTVRALCFKLKEMLVKESNVIHIQTPVTVVGDMHGQFHDMLEIFQIGGPVPDTNYLFLGDYVDRGLYSVETIMLLIVLKLRYPSRIHLLRGNHESRQITQSYGFYTE 125          
The following BLAST results are available for this feature:
BLAST of CX287606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
FYPP3_ARATH2.221e-4566.94Phytochrome-associated serine/threonine protein ph... [more]
PPP6_HUMAN1.102e-4464.52Serine/threonine-protein phosphatase 6 catalytic s... [more]
FYPP1_ARATH2.455e-4465.32Phytochrome-associated serine/threonine protein ph... [more]
FYPP_PEA3.207e-4465.32Phytochrome-associated serine/threonine protein ph... [more]
PPP6_DROME4.188e-4462.40Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPX1_PARTE2.079e-4365.32Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX2_PARTE3.545e-4365.32Serine/threonine-protein phosphatase PP-X homolog ... [more]
YOU5_SCHPO6.048e-4362.90Putative serine/threonine-protein phosphatase C26H... [more]
YD44_SCHPO1.347e-4263.71Putative serine/threonine-protein phosphatase C22H... [more]
PP2A4_YEAST4.334e-4164.23Serine/threonine-protein phosphatase PP2A-like PPG... [more]

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Properties
Property NameValue
Genbank descriptionC01011D05SK Veg1 Citrus clementina cDNA clone C01011D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287606 ID=CX287606; Name=CX287606; organism=Citrus clementina; type=EST; length=592bp
AATCACTGAAGCCTTCTCTCTTTTTTTTTTAAAATTTTTTTTGTTGAGAT
ACAAAATTGAATTTTGATTATAGGGTTTCGAAAAAATTAGGGTTTGTTTG
TTGAAATTTAGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCT
GAGTCTGCAAATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGG
TCCCTTCAAATTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATG
CAGTGCAAGCCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGC
CAAGGAGATATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTG
TTACAATTTGTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTT
TTCCGCATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGA
TTATGTTGACCGTGGTTACTATTCAGTAGAAACTGTTACGCTATTGGTAT
CTCTGAAAGTGCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCAT
GAAAGTCGTCAGATTACTCAGGTCTATGGATTCTATGATGAG
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