CX287610

Overview
NameCX287610
Unique NameCX287610
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length534
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287610 vs. ExPASy Swiss-Prot
Match: PI51A_HUMAN (Phosphatidylinositol-4-phosphate 5-kinase type-1 alpha OS=Homo sapiens GN=PIP5K1A PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.601e-14
Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 3
Query:   15 EVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRIT---DKPXXXXXXXXXXXXXXXXXXXXXXXSWFQELIRQIDRDCEFLEAERIMDYSLLIGLH 401
            E + L ++LP YY ++ Q   TL+ KF+G++CV+  GG+  R +VM NL     ++H ++DLKGS+Y R     ++                          +  L + + RDC  L++ +IMDYSLL+ +H
Sbjct:  200 EAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQ-AGGKNIRIVVMNNLLPRSVKMHIKYDLKGSTYKRRASQKEREKPLPTFKDLDFLQDIPDGLFLDADMYNALCKTLQRDCLVLQSFKIMDYSLLMSIH 330          
BLAST of CX287610 vs. ExPASy Swiss-Prot
Match: PIPSL_HUMAN (Putative PIP5K1A and PSMD4-like protein OS=Homo sapiens GN=PIPSL PE=5 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.981e-13
Identity = 42/132 (31.82%), Postives = 68/132 (51.52%), Query Frame = 3
Query:   15 EVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRIT---DKPXXXXXXXXXXXXXXXXXXXXXXXSWFQELIRQIDRDCEFLEAERIMDYSLLIGLH 401
            E + L ++LP YY ++ Q   TL+ KF+G++CV+  GG+  R +VM NL     ++H ++DLKGS+Y R     ++                             L + + RDC  L++ +IMDYSLL+ +H
Sbjct:  147 EAEFLQKLLPGYYINLNQNPRTLLPKFYGLYCVQ-TGGKNIRIVVMNNLLPRSVKMHIKYDLKGSTYRRRASQKEREKPLPTFKDLDFLQDIPDGLFLDADVHNALCKTLQRDCLVLQSFKIMDYSLLMSIH 277          
BLAST of CX287610 vs. ExPASy Swiss-Prot
Match: PI51B_CHICK (Phosphatidylinositol-4-phosphate 5-kinase type-1 beta OS=Gallus gallus GN=PIP5K1B PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.981e-13
Identity = 42/132 (31.82%), Postives = 68/132 (51.52%), Query Frame = 3
Query:   15 EVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRIT---DKPXXXXXXXXXXXXXXXXXXXXXXXSWFQELIRQIDRDCEFLEAERIMDYSLLIGLH 401
            E + L ++LP YY ++ Q   TL+ KF+G++CV+  GG   R +VM N+     +++  +DLKGS+Y R     ++                             L++ + RDC  LE+ +IMDYSLL+G+H
Sbjct:  144 EAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQS-GGINIRIVVMNNVLPRALKMNFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHEGLYFDSETHSALMKTLQRDCRVLESFKIMDYSLLLGIH 274          
BLAST of CX287610 vs. ExPASy Swiss-Prot
Match: PI5L1_HUMAN (Phosphatidylinositol-4-phosphate 5-kinase-like protein 1 OS=Homo sapiens GN=PIP5KL1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.401e-12
Identity = 43/133 (32.33%), Postives = 67/133 (50.38%), Query Frame = 3
Query:    3 RGKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITD---KPXXXXXXXXXXXXXXXXXXXXXXXSWFQELIRQIDRDCEFLEAERIMDYSLLI 392
            +G+ EV+ L+  LP Y QH+ ++ ++L+ +  GVH ++   G+KT FIVM ++F    RI  R+D+KG    R  D   +                        SWF   +RQ++ D  FL    ++DYSLLI
Sbjct:  155 QGRREVQALLAHLPRYVQHLQRHPHSLLARLLGVHSLRVDRGKKTYFIVMQSVFYPAGRISERYDIKGCEVSRWVDPAPEGSPLVLVLKDLNFQGKTINLGPQRSWF---LRQMELDTTFLRELNVLDYSLLI 284          
BLAST of CX287610 vs. ExPASy Swiss-Prot
Match: PI5L1_MOUSE (Phosphatidylinositol-4-phosphate 5-kinase-like protein 1 OS=Mus musculus GN=Pip5kl1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.749e-12
Identity = 50/176 (28.41%), Postives = 80/176 (45.45%), Query Frame = 3
Query:    9 KSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITD---KPXXXXXXXXXXXXXXXXXXXXXXXSWFQELIRQIDRDCEFLEAERIMDYSLLIGLHF-RDDYSGDEMKMSPNDKHCLDKRDSDIVGTFMRGYHLLPDM 524
            + EV VL+  LP Y +H+ QY ++L+ +  GV+ ++   G+K  FI+M  +F    RI  R+D+KG +  R  D   +                        SWF   +RQ++ D  FL    ++DYSLL+ + F  +D  G    +    K       S   GT  +   +LPD+
Sbjct:  159 RHEVHVLLAHLPRYVEHLQQYPHSLLARLLGVYSLRVAQGKKKYFIIMQCIFYPTSRISERYDIKGCNISRWVDPAPEGSPLVLVLKDLNFQEKTMRLGAQRSWF---LRQMELDTAFLREVNVLDYSLLVAIQFLHEDEKGIHHSVFSTFKSIQGVSKSK--GTGDQNCRMLPDL 329          
BLAST of CX287610 vs. ExPASy Swiss-Prot
Match: MSS4_YEAST (Probable phosphatidylinositol-4-phosphate 5-kinase MSS4 OS=Saccharomyces cerevisiae GN=MSS4 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.673e-11
Identity = 48/158 (30.38%), Postives = 72/158 (45.57%), Query Frame = 3
Query:   27 LIRMLPSYYQHVCQYKNTLVTKFFGVHCVK-PVGGQ------KTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPXXXXXXXXXXXXXXXXXXXXXXXSWFQE-------------LIRQIDRDCEFLEAERIMDYSLLIGLHFRDDYSGDEMKMS 440
            L + +  YY HV    NTL+ +F+G+H VK P+  Q      K  F+VM NLF     IH  +DLKGS++GR T+                         +W +E              + Q+ +D E L     MDYSLLIG+H  +    D+++++
Sbjct:  506 LRKHIQEYYNHVRDNPNTLICQFYGLHRVKMPISFQNKIKHRKIYFLVMNNLFPPHLDIHITYDLKGSTWGRFTN------LDKERLAKDRSYRPVMKDLNWLEEGQKIKFGPLKKKTFLTQLKKDVELLAKLNTMDYSLLIGIHDINKAKEDDLQLA 657          
The following BLAST results are available for this feature:
BLAST of CX287610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
PI51A_HUMAN3.601e-1431.82Phosphatidylinositol-4-phosphate 5-kinase type-1 a... [more]
PIPSL_HUMAN3.981e-1331.82Putative PIP5K1A and PSMD4-like protein OS=Homo sa... [more]
PI51B_CHICK3.981e-1331.82Phosphatidylinositol-4-phosphate 5-kinase type-1 b... [more]
PI5L1_HUMAN4.401e-1232.33Phosphatidylinositol-4-phosphate 5-kinase-like pro... [more]
PI5L1_MOUSE5.749e-1228.41Phosphatidylinositol-4-phosphate 5-kinase-like pro... [more]
MSS4_YEAST1.673e-1130.38Probable phosphatidylinositol-4-phosphate 5-kinase... [more]

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Properties
Property NameValue
Genbank descriptionC01011D09SK Veg1 Citrus clementina cDNA clone C01011D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287610 ID=CX287610; Name=CX287610; organism=Citrus clementina; type=EST; length=534bp
CACGAGGGAAATCTGAAGTCAAGGTGCTTATTAGGATGCTCCCAAGTTAC
TACCAGCATGTTTGTCAGTACAAAAATACCTTGGTAACAAAGTTCTTTGG
TGTACATTGCGTTAAACCAGTGGGAGGTCAAAAGACTCGGTTTATTGTGA
TGGGCAATCTGTTCTGTTCGGAGTACCGTATTCACAGGCGATTTGACCTG
AAAGGCTCTTCTTATGGCCGCATAACTGACAAGCCTGAGGAGGAAATTGA
TGAGACAACTACGTTAAAGGACCTTGATCTTGATTTTGTATTTCGCCTGG
ATCGCTCATGGTTTCAAGAACTTATCCGACAAATAGATAGAGATTGCGAG
TTCTTGGAAGCAGAAAGAATAATGGATTACAGTCTTTTGATTGGTCTTCA
CTTTCGTGATGATTACTCGGGTGATGAGATGAAGATGTCGCCAAATGATA
AGCACTGTCTTGACAAAAGAGATTCGGATATTGTTGGTACATTTATGCGA
GGATATCACTTGCTGCCAGATATGGACTGGGTTA
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