CX287613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.799e-26 Identity = 61/100 (61.00%), Postives = 66/100 (66.00%), Query Frame = 3 Query: 120 SAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 S KDY +PPPAP + EL WSF+RA IAEFIA +G K PN+ C VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFG Sbjct: 27 SDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRS--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFG 120
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 62/125 (49.60%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 45 QNKNKREKMGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 +NK + K+G + + KDY +PPPAPL + EL WSFYRA IAEF+A +G K + C VGI G+AWAFGGMIF LVYCTAGISGGHINPAVTFG Sbjct: 3 ENKEEDVKLGANKFRETQPLGTAAQTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKR------SDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFG 121
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 59/98 (60.20%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 126 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 KDY +PPPAPL + EL WSFYRA IAEF+A +G N +T +C VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFG Sbjct: 31 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGV------NNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFG 122
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.185e-26 Identity = 58/98 (59.18%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 126 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 KDY +PPPAPL + EL WSFYRA IAEF+A +G +T +C VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFG Sbjct: 35 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSK------STSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFG 126
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.185e-26 Identity = 58/98 (59.18%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 126 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 KDY +PPPAPL + EL WSFYRA IAEF+A +G +T +C VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFG Sbjct: 32 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSK------STSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFG 123
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.069e-25 Identity = 59/98 (60.20%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 126 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 KDY +PPPAPL + EL WSFYRA IAEFIA +G ++ +C VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFG Sbjct: 32 KDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESS------KCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFG 123
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.069e-25 Identity = 57/98 (58.16%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 126 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 KDY +PP AP+ + EEL WSFYRA IAEF+A +G N + +C VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFG Sbjct: 31 KDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGV------NKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFG 122
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.824e-25 Identity = 56/98 (57.14%), Postives = 64/98 (65.31%), Query Frame = 3 Query: 126 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 +DY +PP APL + EL WSFYRA IAEF+A +G + +CG VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFG Sbjct: 37 RDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSK------SPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFG 128
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.382e-25 Identity = 57/98 (58.16%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 126 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 KDY +PPPAPL + EL WSFYRA IAEF+A +G ++ +C VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFG Sbjct: 32 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSK------SSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFG 123
BLAST of CX287613 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.887e-22 Identity = 55/98 (56.12%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 126 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 419 KDY +PPPAPL + EL WSFYR IAEF+A +G +T +C VGI GIAW+FGGMI LVYCTAGIS GHINPAVTFG Sbjct: 31 KDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSK------STSKCATVGIQGIAWSFGGMILALVYCTAGIS-GHINPAVTFG 121 The following BLAST results are available for this feature:
BLAST of CX287613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287613 ID=CX287613; Name=CX287613; organism=Citrus clementina; type=EST; length=419bpback to top |