CX287674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.704e-17 Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 +IL GF+L + + F Q+ I+E +I GY AVLHIH +EE EI L+ +D + + R++ +IC E F DF Q+GRFTLR EGKT+A+GKV +L Sbjct: 506 EILPGFILCEPSNLCHSGRTFDVQIVIIE--HKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 627
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 7.704e-17 Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 +IL GF+L + + F Q+ I+E +I GY AVLHIH +EE EI L+ +D + + R++ +IC E F DF Q+GRFTLR EGKT+A+GKV +L Sbjct: 502 EILPGFILCDPSNLCHSGRTFDVQIVIIE--HKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 623
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.006e-16 Identity = 48/124 (38.71%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 +IL GF+L + F AQ+ I+E +I GY AVLHIH +EE EI L+ +D + + R++ +IC E F DF Q+GRFTLR EGKT+A+GKV +L Sbjct: 373 EILPGFILCDPNNLCHSGRTFDAQIVIIE--HKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 494
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12 Identity = 39/124 (31.45%), Postives = 62/124 (50.00%), Query Frame = 1 Query: 28 ILSGFVLSSVAKPVAAVTEFIAQLQILELLDNA-IFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 I G +L+ + +PV V+E A + IL++ + +FT + A+ H H VE+ + L+ ID G V CR+ + ++C E+F QL RFT+R KT+A GKV + Sbjct: 420 IRPGSILAEINRPVPVVSEIEAIVYILDMPEERRLFTPSFSAIFHAHTAVEDVTVKSLIATIDTKTSTEIKQKPTFCKVGDAVKCRLVLGRAVCLEEFTTNPQLARFTIRDSTKTIAFGKVINI 543
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 35/126 (27.78%), Postives = 61/126 (48.41%), Query Frame = 1 Query: 19 RGDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 R D+ G V+ + P E +A++ +LE GY V+H+H +I+EL+ ++D G + + R++ + E+F+D LGRF+LR G+TVA G++ E+ Sbjct: 312 RQDLKRGDVVGHLNNPPTVAEEIVARIAVLE--HPTTIGVGYTPVMHVHTATVPTQIIELISRLDPATGQTVEQKPQFIKRGDVAMVRLKPLKPVVVERFSDLPALGRFSLRDMGRTVAAGQIIEI 435
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.317e-11 Identity = 36/124 (29.03%), Postives = 57/124 (45.97%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 DI G V S+ P EF A++ ++ GY V+H+H C I E++ +ID G I + + + + EK++DF LGRF +R GKT+ +G+V E+ Sbjct: 308 DIKRGDVAGSLDVPPTVADEFTARIMVM--WHPTAIAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEI 429 The following BLAST results are available for this feature:
BLAST of CX287674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287674 ID=CX287674; Name=CX287674; organism=Citrus clementina; type=EST; length=602bpback to top |