CX287726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_META3 (30S ribosomal protein S7P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps7p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.084e-13 Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 152 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEII 409 ++KLFN+W ++ V D SL YI ++ +VPHT+GR S + F KA+ IVERL N+LM +N G+K + + IV+ A EII Sbjct: 2 EIKLFNKWDTTEIVVKDPSLRHYINLEPI----FVPHTSGRNSGRMFEKAKMNIVERLVNNLMRAEQNTGQKQVTLSIVEEAFEII 83
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_METB6 (30S ribosomal protein S7P OS=Methanoregula boonei (strain 6A8) GN=rps7p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.947e-13 Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 113 VVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIH 412 V AQ + + P LFN+W +V+V D SL Y+ + +PH+ G++S + F KA IVERL N LM N GKK +A+ IV+ A E+I+ Sbjct: 6 VKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQ----IIPHSCGKFSRQEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELIN 101
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_METMP (30S ribosomal protein S7P OS=Methanococcus maripaludis GN=rps7p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.355e-12 Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 152 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEII 409 ++KLF +W E V V D SL YI V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II Sbjct: 2 EIKLFGKWDSETVAVKDPSLKSYISVAPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTII 83
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_METM5 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps7p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.355e-12 Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 152 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEII 409 ++KLF +W E V V D SL YI V VPHTAGR + K F KA+ IVERL N LM + N GKK + IV+ A+ II Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYISVAPV----LVPHTAGRNTKKSFDKAKMNIVERLANKLMANQNNTGKKHETLAIVEEALAII 83
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_METM7 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps7p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.770e-12 Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 152 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEII 409 ++KLF +W E V V D SL Y+ V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSVAPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQENTGKKHETLAIVEEALTII 83
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_METM6 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps7p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.770e-12 Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 152 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEII 409 ++KLF +W E V V D SL Y+ V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSVTPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTII 83
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.312e-12 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 161 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIH 412 LFNRW +V + D ++ Y+ + ++ VPH+ GR + + F KA IVERL N LM N GKK +A+RIV+ A EI+H Sbjct: 12 LFNRWDTSEVTIRDPGIARYVNL----NSMMVPHSCGRLTRQEFHKANMLIVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVH 91
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.312e-12 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 104 ATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIH 412 A A A+ +P KLF W D++ +D S YI V T + HT GR++ K+F+K++ IVERL N LM N GKK +A IV A E++H Sbjct: 9 ADADAAEESEPETAR--AKLFGEWDITDIEYSDPSTERYITV------TPIAHTMGRHADKQFKKSEISIVERLINRLMQTDENTGKKQLATSIVTEAFELVH 103
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_CALMQ (30S ribosomal protein S7P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps7p PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 155 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHL 415 + LF +W DV + D L Y+ ++ +PHT G+Y ++F KA PI+ER+ N LM GRN GKK A +I+K A +II++ Sbjct: 40 ILLFGKWNVNDVVIRDPGLRRYMCLKPM----LLPHTEGKYQNRKFGKAMIPIIERMMNQLMKPGRNAGKKQKAYKILKTAFDIIYV 122
BLAST of CX287726 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.727e-12 Identity = 32/85 (37.65%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 158 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIH 412 KLF +W +V+V D + Y+ + VPHT+G+++ ++F K+ IVERL N++M + +N GKK +A+RIV A +I++ Sbjct: 3 KLFGKWDLTEVEVADAGIKRYVNLDPV----IVPHTSGKHARQQFNKSDITIVERLVNNVMRNAQNTGKKQIALRIVDEAFDIVN 83 The following BLAST results are available for this feature:
BLAST of CX287726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287726 ID=CX287726; Name=CX287726; organism=Citrus clementina; type=EST; length=418bpback to top |