CX287748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_SYNP2 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=groS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.695e-15 Identity = 38/83 (45.78%), Postives = 60/83 (72.29%), Query Frame = -3 Query: 151 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 399 V+E+EE TAGG+LL +++KEKP IG V+AVG G +++G+R + + G+ V+YSKYAG D K S G +Y+ L +++A ++ Sbjct: 22 VSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLS-GDDYVLLSEKDILATVA 103
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_PROMT (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL2A) GN=groS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.695e-15 Identity = 40/84 (47.62%), Postives = 60/84 (71.43%), Query Frame = -3 Query: 151 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 399 V+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ ++ G+ V+YSKYAG D K GSD Y+ L +++AV++ Sbjct: 22 VSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_PROM1 (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL1A) GN=groS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.695e-15 Identity = 40/84 (47.62%), Postives = 60/84 (71.43%), Query Frame = -3 Query: 151 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 399 V+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ ++ G+ V+YSKYAG D K GSD Y+ L +++AV++ Sbjct: 22 VSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_PROM4 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9211) GN=groS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.214e-15 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = -3 Query: 151 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 399 V+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ + G+ V+YSKYAG D K GSD Y+ L +++AV++ Sbjct: 22 VSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_PROM2 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9215) GN=groS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.214e-15 Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = -3 Query: 151 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 399 V+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+S Sbjct: 22 VSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_PROM0 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9301) GN=groS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.214e-15 Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = -3 Query: 151 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 399 V+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+S Sbjct: 22 VSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_ARTS2 (10 kDa chaperonin OS=Arthrobacter sp. (strain FB24) GN=groS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.214e-15 Identity = 39/80 (48.75%), Postives = 59/80 (73.75%), Query Frame = -3 Query: 154 EAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 393 EAE+TTA GL++ ++++EKP G V+AVGPG E+GNR P+ +A G+ V+YSKY G + K + GT Y+ L A +V+A++ Sbjct: 18 EAEQTTASGLVIPDSAQEKPQEGEVVAVGPGRF-EDGNRVPVDVAVGDVVIYSKYGGTEVK-TGGTEYLVLSARDVLAIV 95
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_TRIEI (10 kDa chaperonin OS=Trichodesmium erythraeum (strain IMS101) GN=groS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.892e-15 Identity = 35/83 (42.17%), Postives = 58/83 (69.88%), Query Frame = -3 Query: 151 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 399 V+E+EE TAGG+LL +++KEKP +G V++ GPG +++G R + + G+ V+YSKYAG D K G Y+ L +++A+++ Sbjct: 22 VSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIK-LGGDEYVLLAEKDILAIVN 103
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_CYAA5 (10 kDa chaperonin OS=Cyanothece sp. (strain ATCC 51142) GN=groS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.892e-15 Identity = 39/80 (48.75%), Postives = 57/80 (71.25%), Query Frame = -3 Query: 160 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 399 V+ AEE TAGG+LL + ++EKP IG V+AVGPG +++G+R L + G+ V+YSKYAG D K S G +Y+ L +++A Sbjct: 22 VSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVKLS-GEDYVLLSEKDILA 100
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_SYNS3 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9311) GN=groS PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.777e-15 Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = -3 Query: 154 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVL 399 ++E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K GSD Y+ L +++AV+ Sbjct: 22 ISESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKSNDDGSRQAPEVGIGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVV 102 The following BLAST results are available for this feature:
BLAST of CX287748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 257
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287748 ID=CX287748; Name=CX287748; organism=Citrus clementina; type=EST; length=401bpback to top |