CX287797

Overview
NameCX287797
Unique NameCX287797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length332
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_ASPFU (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus fumigatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.948e-15
Identity = 35/55 (63.64%), Postives = 52/55 (94.55%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+S
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNS 109          
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_PHANO (Nascent polypeptide-associated complex subunit alpha OS=Phaeosphaeria nodorum GN=EGD2 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.850e-15
Identity = 36/55 (65.45%), Postives = 51/55 (92.73%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+ KLG+K I G++RVT+++ KNILFVI++PDV+KSP+S+T+I+FGEAKIEDL+S
Sbjct:   57 AIAKLGLKHIDGITRVTLRRPKNILFVINQPDVYKSPSSNTWIIFGEAKIEDLNS 111          
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_ASPNC (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=egd2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.567e-15
Identity = 34/55 (61.82%), Postives = 52/55 (94.55%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL++
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNA 109          
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA2_HUMAN (Nascent polypeptide-associated complex subunit alpha-2 OS=Homo sapiens GN=NACA2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.577e-15
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLS 327
            AM KLG+  + GV+RVT+ KSKNILFVI+K DV+KSP SD YIVFGEAKI+DLS
Sbjct:   79 AMSKLGLLQVTGVTRVTIWKSKNILFVITKLDVYKSPASDAYIVFGEAKIQDLS 132          
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_AJECN (Nascent polypeptide-associated complex subunit alpha OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD2 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.463e-14
Identity = 34/55 (61.82%), Postives = 51/55 (92.73%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+ KLG+K +PG++RVT+++ K ILFVI++PDV++SP+S+T+I+FGEAKIEDL+S
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKGILFVINQPDVYRSPSSNTWIIFGEAKIEDLNS 111          
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_ASPTN (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=egd2 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.256e-14
Identity = 33/55 (60.00%), Postives = 51/55 (92.73%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+ KLG+K +PG++RVT ++ KNILFVI++P+V++SP+S+T+I+FGEAKIEDL++
Sbjct:   55 AIGKLGLKLVPGITRVTFRRPKNILFVINQPEVYRSPSSNTWIIFGEAKIEDLNA 109          
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_NEUCR (Nascent polypeptide-associated complex subunit alpha OS=Neurospora crassa GN=egd-2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.559e-14
Identity = 34/55 (61.82%), Postives = 49/55 (89.09%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+ KL ++ +PG++RVT+++ KNILFVI+ P+V+KSP S+TYIVFGEAKIEDL++
Sbjct:   58 AIEKLHLQRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNA 112          
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_CHAGB (Nascent polypeptide-associated complex subunit alpha OS=Chaetomium globosum GN=EGD2 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.483e-14
Identity = 34/55 (61.82%), Postives = 48/55 (87.27%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+ KL +  +PG++RVT+++ KNILFVI+ P+V+KSP S+TYIVFGEAKIEDL++
Sbjct:   58 AIEKLHLTRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNA 112          
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_GIBZE (Nascent polypeptide-associated complex subunit alpha OS=Gibberella zeae GN=EGD2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.617e-13
Identity = 34/55 (61.82%), Postives = 48/55 (87.27%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+ KL +  IPG++RVT+++ KNILFVI+ P+V+KSP S+TYIVFGEAKIED+++
Sbjct:   58 ALEKLHLTRIPGITRVTLRRPKNILFVINTPEVYKSPNSNTYIVFGEAKIEDVNA 112          
BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_MAGGR (Nascent polypeptide-associated complex subunit alpha OS=Magnaporthe grisea GN=EGD2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.336e-12
Identity = 33/55 (60.00%), Postives = 46/55 (83.64%), Query Frame = 1
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+ KL +  + G++RVT+++ KNILFVI+ P+V+KSP S TYIVFGEAKIEDL++
Sbjct:   57 AIEKLHLIRVDGITRVTLRRPKNILFVINNPEVYKSPNSGTYIVFGEAKIEDLNA 111          
The following BLAST results are available for this feature:
BLAST of CX287797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
NACA_ASPFU2.948e-1563.64Nascent polypeptide-associated complex subunit alp... [more]
NACA_PHANO3.850e-1565.45Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPNC6.567e-1561.82Nascent polypeptide-associated complex subunit alp... [more]
NACA2_HUMAN8.577e-1572.22Nascent polypeptide-associated complex subunit alp... [more]
NACA_AJECN1.463e-1461.82Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPTN4.256e-1460.00Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEUCR5.559e-1461.82Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHAGB9.483e-1461.82Nascent polypeptide-associated complex subunit alp... [more]
NACA_GIBZE1.617e-1361.82Nascent polypeptide-associated complex subunit alp... [more]
NACA_MAGGR2.336e-1260.00Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionC01013D10SK Veg1 Citrus clementina cDNA clone C01013D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287797 ID=CX287797; Name=CX287797; organism=Citrus clementina; type=EST; length=332bp
GAAGAGCAAAAGCTCAACCCCGATGAGCCTGTAGTCGAGGACGACGATGA
TGAGGATGATGATGAGGAGGATGAGGATGATGACAAGGATGAAGACGATG
TGGAAGGGAAAGGAGATGGAAGTGGTCGCTCAAAACAGAGCAGGAGTGAA
AAGAAGAGTCGGAAAGCAATGTTGAAACTTGGAATGAAGCCAATCCCTGG
TGTCAGTCGAGTTACAGTTAAAAAGAGCAAAAATATTTTGTTTGTTATCT
CCAAACCAGATGTTTTCAAGAGTCCTACATCTGACACATACATTGTCTTT
GGGGAAGCAAAGATCGAGGATCTGAGTTCACA
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